| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3062 |
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| Symbol | hypD |
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| ID | 6483023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2977859 |
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| End bp | 2978980 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642738377 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_002042101 |
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| Protein GI | 194442573 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.0891521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTG TTGACGAGTA CCGTGCGCCG GAACAGGTAA TGCAGCTCAT TGAACACCTG
CGTGAACGCG CCGCCCTTCT TCCTTACACT GCCGAACGTC CGTTGCGCAT TATGGAAGTC
TGCGGGGGTC ATACCCACGC GATTTTTAAA TTTGGTCTCG ATCAGTTACT GCCCGAAAAC
GTGGAGTTTA TTCACGGCCC CGGTTGTCCG GTCTGCGTGC TGCCGATGGG ACGTATCGAC
AGTTGCGTGG AAATCGCCAG TCATCCGGAG GTGATTTTCT GCACCTTTGG CGATGCCATG
CGCGTGCCGG GGAAACAGGG TTCTCTGTTG CAGGCTAAAG CGCGCGGCGC GGATGTGCGT
ATTGTTTATT CTCCGATGGA CGCGCTGAAG CTGGCGCAGG ATAACCCGAC CCGCAAAGTG
GTATTTTTCG GGCTGGGCTT TGAAACCACC ATGCCGACCA CCGCCATCAC GCTGCAGCAG
GCAAAACAGC GTGACGTGCG AAACTTCTAC TTTTTCTGCC AGCACATTAC GCTGATCCCG
ACGCTGCGTA GCCTACTGGA GCAGCCGGAC AACGGCATTG ACGCCTTTCT TGCGCCAGGC
CACGTCAGCA TGGTCATCGG CACCGAGGCG TACCAGTTTA TCGCCGCCGA TTTTCATCGC
CCGCTGGTGG TGGCTGGATT CGAACCGCTT GATCTACTGC AAGGCGTGGT CATGCTGGTT
GAGCAGAAAA TAGCGGCCCT AAGCCAGGTT GAAAACCAAT ACCGTCGCGT GGTGCCGGAT
GCCGGAAACA TGCTGGCGCA GCAGGCCATC GCCGATGTGT TCTGCGTTAA TGGCGACAGC
GAGTGGCGCG GTCTGGGCGT AATTGAATCC TCCGGCGTCC ACCTGACGCC GGAGTATCAG
CGCTTTGACG CCGAAGCGCA TTTCCGCCCA GCGCCGCAGC AGGTCTATGA CGATCCGCGC
GCCCGCTGCG GCGAAGTGCT GACCGGCAGA TGCAAGCCGC ATCAGTGCCC GCTATTTGGT
AAAACATGTA ATCCAGAGAC CGCGTTCGGC GCGCTGATGG TCTCTTCCGA AGGCGCATGC
GCCGCCTGGT ATCAGTATCG TCAGCAGGAG TGTGAAGTTT GA
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| Protein sequence | MRFVDEYRAP EQVMQLIEHL RERAALLPYT AERPLRIMEV CGGHTHAIFK FGLDQLLPEN
VEFIHGPGCP VCVLPMGRID SCVEIASHPE VIFCTFGDAM RVPGKQGSLL QAKARGADVR
IVYSPMDALK LAQDNPTRKV VFFGLGFETT MPTTAITLQQ AKQRDVRNFY FFCQHITLIP
TLRSLLEQPD NGIDAFLAPG HVSMVIGTEA YQFIAADFHR PLVVAGFEPL DLLQGVVMLV
EQKIAALSQV ENQYRRVVPD AGNMLAQQAI ADVFCVNGDS EWRGLGVIES SGVHLTPEYQ
RFDAEAHFRP APQQVYDDPR ARCGEVLTGR CKPHQCPLFG KTCNPETAFG ALMVSSEGAC
AAWYQYRQQE CEV
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