| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3053 |
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| Symbol | hycD |
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| ID | 6482814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2972122 |
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| End bp | 2973045 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642738368 |
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| Product | formate hydrogenlyase subunit D |
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| Protein accession | YP_002042092 |
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| Protein GI | 194446662 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0650] Formate hydrogenlyase subunit 4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.190103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGTGT TTTATCCGTT AATTCAGGCG CTGGTGCTAT TTGCCGTTGC GCCATTGCTG
TCCGGTATTA CTCGCGTGGC GCGCGCCCGT CTACACAATC GCCGTGGGCC GGGCGTGTTG
CAGGAGTACC GCGACATTAT CAAACTGCTC GGTCGTCAGA GTATTGCGCC CGCGGATTCT
GGCTGGGTTT TTCGCCTGAC GCCGTTTGTG ATGGTCGGCG TGATGCTGAC TATCGCCACC
GCGCTGCCGG TTGTCACCGT TGGATCTCCG TTGCCGCAAC TGGGTGATTT AATCACTCTG
ATTTACCTGT TCGCCATCGC GCGCTTCTTC TTCTCTATTG CAGGCCTGGA TACCGGCAGC
CCGTTCACCG CGATCGGCGC CAGCCGTGAA GCGATGCTCG GCGTGCTGGT GGAGCCGATT
CTGCTGCTGG GTCTGTGGGT CGCCGCGCAG GTGGCGGGTT CAACTCATAT CAGCAATATC
GCCGATACCA TTTATCACTG GCCTGTCGCG CGCAGTATTC CGCTGATTCT GGCGCTGTGC
GCCTGCGCCT TCGCCACCTT TATCGAAATG GGCAAGCTGC CGTTCGACCT GGCGGAAGCG
GAGCAGGAGT TGCAGGAAGG GCCGTTGACC GAATACAGCG GTAGCGGCTT TGCGGTGCTG
AAATGGGGCA TCAGCCTTAA GCAACTGGTG GTGCTGCAAA TGTTCGTCGG CGTGTTTCTG
CCGTGGGGAC AGATGGAAAC CTTCAGCGCA GGCGGACTGT TGCTGGCGCT GGTGATTGCC
GTCGTCAAGC TGATTGTCGG CGTACTGGTG ATCGCCCTGT TTGAAAACAG CATGGCGCGA
CTGCGTTTTT GCGCCACTTC ACGCGTGACC TGGGCCGGTT TTGGGTTTGC GTTTTTAGCC
TTCGTCTCCT TGCTGGCGGC GTGA
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| Protein sequence | MSVFYPLIQA LVLFAVAPLL SGITRVARAR LHNRRGPGVL QEYRDIIKLL GRQSIAPADS
GWVFRLTPFV MVGVMLTIAT ALPVVTVGSP LPQLGDLITL IYLFAIARFF FSIAGLDTGS
PFTAIGASRE AMLGVLVEPI LLLGLWVAAQ VAGSTHISNI ADTIYHWPVA RSIPLILALC
ACAFATFIEM GKLPFDLAEA EQELQEGPLT EYSGSGFAVL KWGISLKQLV VLQMFVGVFL
PWGQMETFSA GGLLLALVIA VVKLIVGVLV IALFENSMAR LRFCATSRVT WAGFGFAFLA
FVSLLAA
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