| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3044 |
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| Symbol | hypF |
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| ID | 6483827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2964238 |
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| End bp | 2966478 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642738359 |
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| Product | [NiFe] hydrogenase maturation protein HypF |
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| Protein accession | YP_002042083 |
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| Protein GI | 194444479 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.0442522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATAG ACACACCTTC CGGCGTACAG CTACGCATTC GGGGCAAAGT ACAGGGCGTC
GGTTTTCGTC CTTTTGTCTG GCAGCTGGCG CAGCAGTTGC GATTACACGG CGACGTGTGT
AATGACGGCG ACGGCGTCGT CGTTCGGCTG CTGGAAGAGC CGTCGCAATT TATTGCCGCG
CTCTATCAGG ATTGCCCGCC GCTGGCGCGC ATTGACAGCG TTGAACACGC GTCGTTGGTA
TGGGAGCGCG CACCGACGGA TTTCACCATT CGTCAGAGCG CAGGCGGTTC GATGAACACG
CAAATCGTGC CGGATGCGGC GACCTGCCCG GCATGTCTTG CCGAGATGAA TACCCCAGGC
GAGCGGCGCT ACCGTTATCC TTTCATCAAT TGCACCCACT GTGGACCACG CTTCACCATT
ATTCGTGCTA TGCCCTATGA CCGGCCATTT ACGGTGATGG CGGCGTTTCC CTTGTGTCCG
GAATGCGACA GCGAATACCG CGATCCGTAC GATCGCCGTT TTCATGCCCA GCCCGTTGCC
TGTCCGTCAT GCGGGCCGCA TCTTGAGTGG CGGAGCCAAC ATGAACGAGC GGAAAAAGAG
GCGGCTTTGC AGGCGGCGGT CGCCCAACTG AACGCCGGAG GCATTATTGC CGTTAAAGGG
CTGGGTGGTT TTCATCTGGC CTGCGACGCG CGCAACGATA ACGCAGTGGC GATGCTGCGG
GCGCGTAAAC ATCGTCCGGC GAAACCATTG GCGGTGATGT TGCCCACGGC GCAAACGCTG
CCGAGCGCGG CGCGTTCGCT GCTGACCACG CCAGCGGCCC CGATTGTACT GGTGGATAAG
CAGTATGTAC CTTCGCTGAG TGAGGGCATC GCGCCAGGAC TTACGGAAGT GGGCGTGATG
CTGCCAGCCA ACCCATTGCA ACATCTCTTG TTGCAGGCGC TCAATTACCC GCTGGTGATG
ACATCCGGCA ACCTGAGCGG CAAACCGCCC GCCATCACCA ACGAACAGGC GCTGGACGAT
TTACACGATA TTGCCGATGG TTTTCTGTTG CACAATCGCG ACATTGTACA GCGCATGGAC
GACTCTGTCG TGCGCGACAG CGGCGAAATG CTGCGTCGTT CGCGGGGATA CGTGCCGGAC
GCGATTGCGT TGCCGCCCGG ATTTCGCGAT GTGCCGCCGA TACTTTGTCT GGGCGCGGAT
CTGAAAAACA CGTTCTGTCT GGTACGCGGC GAACAGGCAG TTGTCAGCCA GCATTTAGGC
GATCTCAGCG ATGACGGTAT CCAGGCGCAG TGGCGCGAGG CATTGCGTTT GATCCAGTCA
ATCTACGATT TTACCCCAGA GCGTATCGTC TGTGATGCGC ATCCGGGCTA TGTTTCCAGT
CAGTGGGCCA GTGAGATGCG TCTACCGACA GAGACGGTGT TACACCATCA TGCCCATGCG
GCGGCTTGCC TGGCCGAGCA TGGGTGGCCG CTGGACGGCG GAGAGGTGAT TGCCCTGACG
GTAGACGGTA TCGGCATGGG TGAGAATGGC GCGCTATGGG GCGGAGAATG TTTGCGGGTC
AATTATCGCG AATGCGAGCA TTTAGGCGGT TTACCCGCCG TGGCGCTGCC GGGAGGCGAT
CTGGCTGCCA AACAGCCGTG GCGTAATCTG TTAGCGCAGT GCCTGCGCTT TGTGCCGGAC
TGGCAGGATT ACCCGGAGAC AGCGGGGCTG CAACAGCAAA ACTGGAGTGT CCTGGCGCGC
GCCATTGAGC GCGGCGTCAA TTCCCCGTTG GCCTCTTCCT GCGGGCGGTT GTTTGACGCG
GTGGCTGCCG CGCTTCGCTG CGCGCCAGCA TCGCTTAGCT ATGAGGGCGA GGCCGCCTGC
GCGCTGGAGG CGCTGGCCTC TCAATGCGCT AACGTTGAGC ATCCGGTAAC GATGCCGCTT
AACGGCGCTC AACTGGACGT CGCTGTTTTC TGGCGTCAAT GGTTGAACTG GCAGGCCACG
CCCGCGCAAC GCGCCTGGGC TTTTCATGAT GCGCTGGCGT GCGGGTTTGC CACGCTAATG
CGCCAGCAGG CTACGGCGCG GGGGATAACC ACTCTGGTCT TCAGCGGCGG GGTAATACAC
AACCGCTTAC TTCGCGCGCG TCTTGCCTTT TATCTTTCTG ATTTTAAATT GTTATTTCCG
CAGCGGTTAC CGGCGGGCGA CGGCGGGCTG TCGTTTGGAC AGGGCGTGAT TGCCGCAGCG
CGAGCGTTAA GTGAAGTGTA G
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| Protein sequence | MAIDTPSGVQ LRIRGKVQGV GFRPFVWQLA QQLRLHGDVC NDGDGVVVRL LEEPSQFIAA
LYQDCPPLAR IDSVEHASLV WERAPTDFTI RQSAGGSMNT QIVPDAATCP ACLAEMNTPG
ERRYRYPFIN CTHCGPRFTI IRAMPYDRPF TVMAAFPLCP ECDSEYRDPY DRRFHAQPVA
CPSCGPHLEW RSQHERAEKE AALQAAVAQL NAGGIIAVKG LGGFHLACDA RNDNAVAMLR
ARKHRPAKPL AVMLPTAQTL PSAARSLLTT PAAPIVLVDK QYVPSLSEGI APGLTEVGVM
LPANPLQHLL LQALNYPLVM TSGNLSGKPP AITNEQALDD LHDIADGFLL HNRDIVQRMD
DSVVRDSGEM LRRSRGYVPD AIALPPGFRD VPPILCLGAD LKNTFCLVRG EQAVVSQHLG
DLSDDGIQAQ WREALRLIQS IYDFTPERIV CDAHPGYVSS QWASEMRLPT ETVLHHHAHA
AACLAEHGWP LDGGEVIALT VDGIGMGENG ALWGGECLRV NYRECEHLGG LPAVALPGGD
LAAKQPWRNL LAQCLRFVPD WQDYPETAGL QQQNWSVLAR AIERGVNSPL ASSCGRLFDA
VAAALRCAPA SLSYEGEAAC ALEALASQCA NVEHPVTMPL NGAQLDVAVF WRQWLNWQAT
PAQRAWAFHD ALACGFATLM RQQATARGIT TLVFSGGVIH NRLLRARLAF YLSDFKLLFP
QRLPAGDGGL SFGQGVIAAA RALSEV
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