| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3041 |
|---|
| Symbol | |
|---|
| ID | 6482691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2959866 |
|---|
| End bp | 2961386 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642738356 |
|---|
| Product | anaerobic nitric oxide reductase transcription regulator |
|---|
| Protein accession | YP_002042080 |
|---|
| Protein GI | 194445900 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.831786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.0160289 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTT CCGTGGAGGT ATTGGCGGGC ATCGCCATTG AGTTACAACG CGGCATTGGG
CATCAGGATC GTTTTCAGCG GCTGATTACT ACGCTGCGTC AGGTGCTGGC GTGCGACGCC
TCGGCGCTGT TGCGTTATGA ATCACGACAA TTTATTCCAC TGGCGATTGA TGGCCTGGCG
CAGGACGTCC TCGGCAGACG TTTTACCCTG GAAGGGCATC CGCGCCTGGA AGCCATCGCC
CGCGCGGGGG ACGTGGTGCG TTTTCCGGCC GATAGCGATT TGCCCGATCC GTATGACGGG
TTAATTCCCG GACAGGAAAG CCTGAAAGTC CACGCCTGTG TTGGTCTGCC GCTGTTTGCC
GGACAGAACC TCATCGGTGC GCTGACCCTT GATGCTATGA CGCCGGAGCA GTTCGAGGTA
TTTAGCGATG AAGAGCTGCG GCTTGTCGCC GCGCTGGCCG CCGGGGCATT GAGCAATGCG
CTGTTAATTG AACAACTGGA AAGCCAGAAC ATACTGCCAG GGTCGTCAGG CGTGTTTGAA
CCGATAAAAG AGACGCACAT GATCGGCCTG TCGCCGGCGA TGACGCAGTT GAAAAAAGAG
ATCGAGATTG TGGCGGGCTC CGATCTTAAC GTGCTGATCG GCGGTGAAAC GGGGACCGGT
AAAGAGCTGG TGGCGAAAGC TATTCACCAG GGCTCCCCCA GAGCGGTCAA TCCGCTGGTC
TATCTCAACT GCGCCGCGCT GCCGGAAAGC GTGGCGGAGA GCGAGTTGTT TGGTCATGTA
AAAGGGGCTT TTACCGGGGC TATCAGTAAT CGTAGCGGTA AGTTCGAAAT GGCGGATAAC
GGTACGCTGT TTCTGGATGA GATTGGCGAA CTGTCGCTGG CGCTACAGGC CAAGCTGCTT
CGCGTGTTGC AGTATGGCGA TATTCAGCGC GTCGGCGACG ATCGTAGCCT GCGCGTGGAT
GTGCGGGTGT TGGCGGCGAC CAACCGTGAC CTGCGTGAAG AGGTGCTGGC GGGGCGTTTT
CGCGCCGATC TGTTCCATCG CCTGAGCGTT TTCCCGCTCT TTGTGCCGCC GCTGCGCGAG
CGCGGCGATG ATGTGGTGCT GCTGGCGGGC TATTTTTGCG AGCAGTGCCG GCTGCGGCTG
GGGCTGTCCC GCGTGGTGCT GAGTACCGGC GCGCGACGCC ATTTGCTCAA CTATGGCTGG
CCGGGCAACG TCCGGGAGCT GGAACATGCC ATTCACCGTG CGGTTGTACT GGCGAGAGCG
ACCCGGGCAG GGGATGAGGT GATACTGGAG GCACAGCATT TTGCCTTGTC AGAGGACGTT
TTACCCGCGC CGCCTGCGGA AAGCTTTCTG GCGCTGCCGA CTTGCCGCAA TTTGCGCGAA
TCGACGGAGA ACTTCCAGCG AGAGATGATT CGCCAGGCGC TGGCGCAAAA TAATCATAAC
TGGGCGGCCA GCGCGCGGGC GCTGGAAACC GACGTCGCCA ACCTGCATCG GCTGGCGAAG
CGTCTGGGAC TGAAGGATTA G
|
|---|
| Protein sequence | MSFSVEVLAG IAIELQRGIG HQDRFQRLIT TLRQVLACDA SALLRYESRQ FIPLAIDGLA
QDVLGRRFTL EGHPRLEAIA RAGDVVRFPA DSDLPDPYDG LIPGQESLKV HACVGLPLFA
GQNLIGALTL DAMTPEQFEV FSDEELRLVA ALAAGALSNA LLIEQLESQN ILPGSSGVFE
PIKETHMIGL SPAMTQLKKE IEIVAGSDLN VLIGGETGTG KELVAKAIHQ GSPRAVNPLV
YLNCAALPES VAESELFGHV KGAFTGAISN RSGKFEMADN GTLFLDEIGE LSLALQAKLL
RVLQYGDIQR VGDDRSLRVD VRVLAATNRD LREEVLAGRF RADLFHRLSV FPLFVPPLRE
RGDDVVLLAG YFCEQCRLRL GLSRVVLSTG ARRHLLNYGW PGNVRELEHA IHRAVVLARA
TRAGDEVILE AQHFALSEDV LPAPPAESFL ALPTCRNLRE STENFQREMI RQALAQNNHN
WAASARALET DVANLHRLAK RLGLKD
|
|---|
| |