| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3040 |
|---|
| Symbol | gutQ |
|---|
| ID | 6485273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 2958904 |
|---|
| End bp | 2959869 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642738355 |
|---|
| Product | D-arabinose 5-phosphate isomerase |
|---|
| Protein accession | YP_002042079 |
|---|
| Protein GI | 194442564 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.00853446 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATG CACTACTAAA CGCGGGCCGT CAGACCTTAA TGCTGGAGCT ACAGGAAGCC
AGCCGTCTGC CGGAGCGTCT GGGCGATGAT TTTGTCCGCG CCGCCAATAT CATTATTCAC
TGTGAAGGCA AAGTGATCGT TTCCGGTATT GGTAAATCAG GTCATATTGG TAAAAAAATC
GCCGCGACGC TTGCCAGTAC CGGTACTCCC GCTTTTTTTG TTCATCCGGC GGAAGCACTG
CATGGCGATC TGGGGATGAT TGAAAGCCGC GACGTGATGT TATTTATCTC CTATTCCGGC
GGCGCAAAAG AACTCGACCT CATCATCCCG CGTCTGGAAG ATAAATCCGT CGCGCTGCTG
GCGATGACCG GTAAACTTCA CTCTCCGCTG GGGCGAGCGG CAAAAGCCGT TCTGGATATT
TCCGTCGAGC GTGAAGCCTG CCCGATGCAT CTGGCGCCGA CATCCAGTAC CGTCAATACG
CTGATGATGG GCGATGCGCT GGCGATGGCG GTCATGCAGG CGCGCGGTTT TAACGAAGAA
GATTTCGCCC GTTCGCATCC GGCTGGCGCA CTGGGCGCGC GTTTGCTCAA TAATGTGCAT
CACCTGATGC GCCAGGGCGA TGCAATACCG CAGGTGATGC TTGCCACCAG CGTGATGGAT
GCCATGCTGG AACTTAGCCG TACCGGGCTG GGGCTGGTGG CGGTTTGCGA TGAGCAACAT
GTTGTGAAAG GCGTCTTTAC CGACGGCGAC CTGCGTCGCT GGCTGGTGGG CGGCGGCGCG
CTCACCACGC CGGTAAGCGA AGCCATGACG CCCAACGGTA TTACGCTCCA GGCGCAAAGC
CGCGCCATTG ACGCCAAAGA GCTCCTGATG AAACGCAAAA TTACCGCCGC GCCAGTGGTC
GATGAAAACG GCAAACTCAC CGGCGCCATT AACCTACAGG ATTTCTACCA GGCGGGGATT
ATCTAA
|
|---|
| Protein sequence | MSDALLNAGR QTLMLELQEA SRLPERLGDD FVRAANIIIH CEGKVIVSGI GKSGHIGKKI
AATLASTGTP AFFVHPAEAL HGDLGMIESR DVMLFISYSG GAKELDLIIP RLEDKSVALL
AMTGKLHSPL GRAAKAVLDI SVEREACPMH LAPTSSTVNT LMMGDALAMA VMQARGFNEE
DFARSHPAGA LGARLLNNVH HLMRQGDAIP QVMLATSVMD AMLELSRTGL GLVAVCDEQH
VVKGVFTDGD LRRWLVGGGA LTTPVSEAMT PNGITLQAQS RAIDAKELLM KRKITAAPVV
DENGKLTGAI NLQDFYQAGI I
|
|---|
| |