| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3039 |
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| Symbol | srlR |
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| ID | 6484611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2958138 |
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| End bp | 2958911 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642738354 |
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| Product | DNA-bindng transcriptional repressor SrlR |
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| Protein accession | YP_002042078 |
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| Protein GI | 194445233 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.00817735 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACCTC GTCAGCGTCA GGCCGCGATT CTGGAGCACC TGCAAAAACA GGGAAAATGC
TCGGTTGAAG AACTGGCCCA GTACTTTGAC ACGACAGGCA CCACTATCCG TAAAGATCTG
GTCATTCTGG AAAATGCCGG AACCGTCATC CGCACCTATG GCGGCGTGGT GTTGAATAAA
GAAGAGTCCG ATCCGCCTAT TGATCACAAA ACGCTTATCA ACACCCACAA AAAAGCGCTG
ATAGCCGCAG CCGCTGTGAA ATATATCCAT GATGGCGATT CCATTATTCT GGACGCCGGA
AGTACCGTGT TACAGATGGT GCCGTTGCTT TCGCGTTTTA GCAACATCAC GGTGATGACC
AACAGCCTCC ATATTGTTAA CGCGCTATCG GAACTGGACA ACGAACAAAC TATCCTGATG
CCCGGCGGCA CCTTCCGTAA AAAATCGGCG TCATTTCACG GTCAACTGGC GGAAAACGCC
TTTGAGCAAT TCAGCTTTGA TAAACTTTTC ATGGGAACTG ACGGTATTGA CCTGAATGTC
GGTGTGACCA CGTTCAATGA GGTTTACACC GTCAGTAACG CAATGTGCAA TGCAGCACGC
GAGGTGATTC TGATGGCGGA CTCCTCAAAA TTTGGTCGTA AAAGCCCCAA TGTGGTGTGC
AGTCTGGAAA CCGTCGACAA ACTGATCACG GACGCGGGGA TCGATCCGGC ATTTCGTCAG
GCGCTGGAAG CAAAAGGGAT TGAAGTAATC ATAACCGGAG AAAGCAATGA GTGA
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| Protein sequence | MKPRQRQAAI LEHLQKQGKC SVEELAQYFD TTGTTIRKDL VILENAGTVI RTYGGVVLNK
EESDPPIDHK TLINTHKKAL IAAAAVKYIH DGDSIILDAG STVLQMVPLL SRFSNITVMT
NSLHIVNALS ELDNEQTILM PGGTFRKKSA SFHGQLAENA FEQFSFDKLF MGTDGIDLNV
GVTTFNEVYT VSNAMCNAAR EVILMADSSK FGRKSPNVVC SLETVDKLIT DAGIDPAFRQ
ALEAKGIEVI ITGESNE
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