| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3037 |
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| Symbol | srlD |
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| ID | 6483719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2956725 |
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| End bp | 2957504 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642738352 |
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| Product | sorbitol-6-phosphate dehydrogenase |
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| Protein accession | YP_002042076 |
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| Protein GI | 194444244 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.00366072 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCAAG TTGCCGTTGT CATTGGCGGA GGCCAGACCC TGGGGGCATT CCTTTGCCGT
GGGCTTGCAG AAGAAGGATA CCGCGTGGCG GTCGTTGATA TTCAAAGCGA TAAAGCCGCG
AATGTCGCCC AGGAAATTAA CGCCGATTTT GGCGAAGGTA TGGCGTACGG TTTTGGCGCC
GACGCTACCA GCGAGCAGAG CGTGCTGGCG CTGTCCCGCG GCGTAGACGA GATTTTCGGG
CGCGTCGATC TGCTGGTTTA CAGCGCGGGT ATCGCCAAAG CGGCGTTTAT CAGCGATTTC
CAGTTGGGCG ATTTTGACCG CTCGCTACAG GTGAATCTGG TGGGCTATTT CCTCTGCGCC
CGTGAGTTTT CCCGCCTGAT GATCCGCGAC GGCATTCAGG GGCGCATTAT TCAGATTAAC
TCTAAATCCG GCAAAGTGGG CAGTAAACAC AACTCCGGCT ACAGCGCGGC GAAATTCGGC
GGCGTGGGGT TAACCCAGTC TCTGGCGCTG GATCTGGCGG AATACGGCAT TACCGTACAC
TCGTTGATGC TCGGCAACCT GTTGAAATCG CCAATGTTCC AGTCACTGCT GCCGCAATAC
GCCACTAAAC TGGGCATTAA GCCCGACGAG GTGGAACAGT ATTACATTGA TAAGGTACCG
CTCAAACGCG GGTGTGATTA TCAGGATGTG CTGAACATGC TGCTATTTTA TGCCAGCCCG
AAAGCGTCTT ATTGCACCGG GCAGTCGATC AACGTAACCG GCGGTCAAGT GATGTTCTGA
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| Protein sequence | MNQVAVVIGG GQTLGAFLCR GLAEEGYRVA VVDIQSDKAA NVAQEINADF GEGMAYGFGA
DATSEQSVLA LSRGVDEIFG RVDLLVYSAG IAKAAFISDF QLGDFDRSLQ VNLVGYFLCA
REFSRLMIRD GIQGRIIQIN SKSGKVGSKH NSGYSAAKFG GVGLTQSLAL DLAEYGITVH
SLMLGNLLKS PMFQSLLPQY ATKLGIKPDE VEQYYIDKVP LKRGCDYQDV LNMLLFYASP
KASYCTGQSI NVTGGQVMF
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