Gene SNSL254_A3032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3032 
Symbol 
ID6486856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2952499 
End bp2952996 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content59% 
IMG OID642738347 
Productcompetence damage-inducible protein A 
Protein accessionYP_002042071 
Protein GI194445808 
COG category[R] General function prediction only 
COG ID[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.162361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.00262793 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGACA GTGAACTGAT GCGGCTTAGC GAACAGGTCG GGCTGGCGTT AAAAGCGCGC 
GGGGCGACCG TAACGACAGC AGAGTCCTGT ACCGGCGGCT GGCTGGCGAA AGCCATTACC
GACATCGCCG GAAGCTCCGC CTGGTTTGAA CGCGGCTTTG TCACCTATAG TAATGAAGCC
AAAGCGCAGA TGATTGGCGT GCGTGAAGAG ACCCTGGCGC AGCATGGCGC GGTCAGCGAA
CCCGTAGTGG TCGAAATGGC GATCGGGGCG CTGAAGGCCG CTCGCGCCGA TTTTTCTGTC
GCTATTAGCG GGATTGCCGG GCCGGATGGC GGCAGTGAAG AAAAGCCGGT TGGTACGGTG
TGGTTTGCTT TCGCCAGCGT CAGCGGAGAA GGGATTACGC GTCGGGAATG CTTCAGCGGC
GACCGTGAAT CGGTGCGTCG ACAGGCGACG ACGTACGCGC TACAAACCCT GTGGCAACAA
TTTCTACAAA ACACTTGA
 
Protein sequence
MTDSELMRLS EQVGLALKAR GATVTTAESC TGGWLAKAIT DIAGSSAWFE RGFVTYSNEA 
KAQMIGVREE TLAQHGAVSE PVVVEMAIGA LKAARADFSV AISGIAGPDG GSEEKPVGTV
WFAFASVSGE GITRRECFSG DRESVRRQAT TYALQTLWQQ FLQNT