Gene SNSL254_A3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3016 
Symbol 
ID6486370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2941195 
End bp2942565 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content47% 
IMG OID642738332 
Productputative glycoporin 
Protein accessionYP_002042061 
Protein GI194446041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.000112246 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGCTA AATATTTGGC GCTGATGATC GGTGCTTGCT TTTCTCATAA CCTTTGGGCA 
GCGAATAATA TCACTATTGA GCAGCGTCTG GCTGAACTGG AGCAACGTGT TGTTAATGCT
GAAAAACGGG CATCCGATGC CGAGGCGCAA ATTCGCTCGC TGAAACAGCA GCAGGTCGCC
GCTACGCCGA CGGTGAATGT CCAGTCCGCC GAGCCCATTG CAGCAGATAA AACGCCGCCG
AAGCTGACCT TATCCGGATT CAGCGATATT AAGTTCTATG GCGATGTCGA ATTTAATATG
GATGCGGCAA GCCGTTCCGG TAGCCTGACC TCGATGAGAA CGTCAGCGAA TAAAGATTGG
GCATCAGGAA CCAATGAACG CTGGGATATT AACGGACGCC TGTTGCTGGG CTTTGATGGC
TACCAGCGGC TGGACAATGG TAATTTTGCC GGATTCTCTG TACAGCCTCT GGCGGACCTG
ACCGGAAAAA TGAACCTTGA TGATGCCGTT TTCTTCTTTG GTCGTGAGAA TGACTGGAAA
ATTAAGGTTG GTCGTTTTGA AGCCTACGAT ATGTTCCCGC TGAATCAGGA TACGTTTATT
GAATATTCGG GGAATACAGC GAACGATCTT TACAGTGACG GTTACGGCTA TATCTATATG
ATGAAAGAAG GACGGGGACG TAGCGACAGT GGGGGTAACT TCCTGCTGAG TAAAACCATC
GACAACTGGT ATTTCGAAGT TAACACATTG CTGGAAAATG GCAGTACGTT ATATACCGAG
AAGCAGTACC ACGGAATGGA TTTAACCAAC GATAAAAACG TGGCTTACGT CCGTCCGGTT
ATCGCCTGGC AAAACGGGCG TTTTTCAACG GCGATAGCGA TGGAAAGTAA CGTCGTTAAC
AACGCCTATG GCTATTATGA GAATGGGAAG TGGATCGATC AGTCAGATCG TACGGGCTAT
GGTTTTACCA TGACCTGGAA TGGTCAAAAA ACTGACCCGG AAGATGGCGC GGTGATTAAC
CTGAATACCG CTTATATGGA TGCGACCGAT GAGACAGATT TTACCGCTGG GGTGAATGCG
CTGTGGCATC GATTTGAACT GGGTTATATC TATGCGCATA ACAAAATCGA AGCCTTCAAT
GCTACCAATA TCGATGCCGT TTGTGAGGAC GATTGCTGGA TCACCGATCC CGGCAATTAT
GATATTCACA CCATTCATGC CTCATATTTA TTCCCCAACG TGATGGATAT GAAAAACTTT
AACATCTACC TCGGCGCCTA TGCTTCATGG GTAGAGGCCA ATCCGAATAA TGGCGATAAC
AGTGAAGATG CGCGTTACGG CGGGCGTCTG AGATTCAAAT ATTTCTTCTG A
 
Protein sequence
MKAKYLALMI GACFSHNLWA ANNITIEQRL AELEQRVVNA EKRASDAEAQ IRSLKQQQVA 
ATPTVNVQSA EPIAADKTPP KLTLSGFSDI KFYGDVEFNM DAASRSGSLT SMRTSANKDW
ASGTNERWDI NGRLLLGFDG YQRLDNGNFA GFSVQPLADL TGKMNLDDAV FFFGRENDWK
IKVGRFEAYD MFPLNQDTFI EYSGNTANDL YSDGYGYIYM MKEGRGRSDS GGNFLLSKTI
DNWYFEVNTL LENGSTLYTE KQYHGMDLTN DKNVAYVRPV IAWQNGRFST AIAMESNVVN
NAYGYYENGK WIDQSDRTGY GFTMTWNGQK TDPEDGAVIN LNTAYMDATD ETDFTAGVNA
LWHRFELGYI YAHNKIEAFN ATNIDAVCED DCWITDPGNY DIHTIHASYL FPNVMDMKNF
NIYLGAYASW VEANPNNGDN SEDARYGGRL RFKYFF