Gene SNSL254_A3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3013 
SymbolmprA 
ID6482264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2937762 
End bp2938292 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content49% 
IMG OID642738329 
Producttranscriptional repressor MprA 
Protein accessionYP_002042058 
Protein GI194445291 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.00073704 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATAGTT CGTTTACGCC CATTGAACAA ATGCTAAAAT TTCGCGCCAG CCGTCACGAA 
GACTTTCCTT ACCAGGAAAT TCTTTTGACT CGTCTTTGTA TGCACATGCA AGGCAAGCTC
CTGGAAAACC GCAATAAAAT GCTGAAGGCT CAAGGGATTA ACGAGACGTT GTTTATGGCG
TTGATTACGC TGGAGTCTCA GGAAAACCAC AGTATTCAGC CGTCTGAATT AAGCTGCGCG
CTGGGTTCAT CTCGCACCAA TGCGACACGC ATTGCAGATG AGCTGGAAAA ACGCGGCTGG
ATTGAGCGTC GTGAGAGCGA TAACGACCGC CGTTGCCTGC ATCTGCAATT AACGGAGAAA
GGCCAGGCAT TTTTGCAAGA AGTGCTTCCG CCTCAGCATC ATTGTCTGCA TCAACTCTGG
TCATCACTTA GCACAGCCGA AAAAGATCAA CTTGAGCACA TCACCCGTAA ACTCCTGACG
CGTCTTGATC AAATGGAGCA GGAAGGCACT GTTCTTGAGG CGCTGCGCTA A
 
Protein sequence
MDSSFTPIEQ MLKFRASRHE DFPYQEILLT RLCMHMQGKL LENRNKMLKA QGINETLFMA 
LITLESQENH SIQPSELSCA LGSSRTNATR IADELEKRGW IERRESDNDR RCLHLQLTEK
GQAFLQEVLP PQHHCLHQLW SSLSTAEKDQ LEHITRKLLT RLDQMEQEGT VLEALR