Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3007 |
Symbol | |
ID | 6485229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2929123 |
End bp | 2931267 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642738323 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_002042052 |
Protein GI | 194445580 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.00467921 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGCAACAA CTACCCCGGA GCGCGTAATG CAGGAAACCA TGGATTACCA CGCCCTGAAC GCGATGCTGA ATCTTTATGA TAAAGCAGGC CATATTCAGT TCGACAGGGA CCAGCAGGCG ATCGACGCCT TCTTTGCCGC CCACGTCTGC CCGCATTCCG TGACGTTTGC CAGCCAGCAT GAACGTCTGG AGACGCTGGT TCGGGAAGGG TATTACGATG ACGCTGTCCT CGCGCGTTAC GACCGCGCCT TCGTCCTCCG CCTGTTCGAG CACGCCCACG CCAGCGGCTT TCGCTTCCAG ACGTTTCTTG GCGCCTGGAA GTTCTATACC AGTTACACGC TGAAAACCTT CGACGGCAAA CGTTATCTGG AACACTTTGA AGATCGGGTG ACAATGGTGG CGTTGACGCT GGCGCAGGGT GACGAAACGC TGGCCACCCA ACTGACCGAT GAAATGCTTT CTGGTCGCTT TCAGCCCGCT ACCCCGACTT TTTTAAATTG CGGTAAACAG CAGCGTGGGG AACTGGTCTC CTGCTTCCTG CTCCGTATCG AAGACAATAT GGAATCGATC GGGCGAGCGG TGAATTCGGC GCTGCAACTC TCCAAACGCG GCGGCGGCGT CGCATTTTTA CTCTCCAATC TGCGCGAGGC GGGCGCGCCG ATCAAACGCA TTGAGAATCA GTCTTCCGGC GTAATCCCGG TGATGAAAAT GCTGGAAGAC GCGTTTTCGT ATGCCAACCA GCTTGGCGCG CGCCAGGGGG CCGGCGCGGT TTATCTCCAT GCGCACCACC CGGACATTCT GCGTTTTCTG GATACCAAAC GAGAAAACGC TGACGAAAAA ATCCGGATCA AAACGCTCTC TCTCGGCGTG GTGATCCCGG ACATCACCTT CCGGCTGGCG AAAGAAAACG CGCAAATGGC GCTCTTTTCG CCCTATGACA TACAACGACG CTACGGCAAA CCGTTTGGCG ATATCGCCAT TAGCGAACGG TACGATGAAT TAATTGCCGA TCCGCACGTG CGCAAAACCT ATATTAACGC CCGTGACTTT TTTCAAACAC TGGCGGAGAT TCAGTTCGAA TCCGGGTATC CCTACATCAT GTTTGAAGAT ACGGTAAACC GCGCGAATCC TATTGCTGGT CGCATTAATA TGAGCAACCT GTGCTCGGAA ATTTTACAGG TCAATAGCGC CTCTCGTTAC GACGATAACC TTGACTATAC CCACATCGGG CATGACATTT CCTGCAATCT CGGCTCGCTG AATATCGCTC ACGTCATGGA TTCACCGGAC ATTGGTCGTA CCGTAGAAAC CGCTATTCGC GGCCTGACGG CGGTGTCGGA CATGAGCCAT ATACGCAGCG TACCCTCAAT AGCCGCCGGT AATGCCGCCT CTCATGCCAT CGGTCTGGGC CAGATGAATC TGCATGGCTA TCTGGCGAGA GAAGGCATTG CCTACGGTTC GCCGGAGGCG TTGGATTTCA CCAATCTCTA TTTTTACACC ATTACCTGGC ATGCCGTGCA TACTTCAATG CGGCTGGCCC GCGAACGCGG CAAAACCTTC GCCGGATTTG CGCAGTCGCG CTATGCCAGC GGCGACTATT TTACGCAGTA TTTACAGGAC GACTGGCAAC CGAAAACGGC GAAAGTCAGA ACGCTATTTG CCCGCAGCGG CATTACGCTG CCCACACGAG AAATGTGGCT AAAGCTGCGC GACGATGTGA TGCGCTATGG CATCTATAAC CAAAATTTGC AGGCGGTGCC GCCGACCGGT TCGATTTCTT ACATTAATCA TGCGACCTCC AGCATTCATC CGATTGTGGC CAAAATTGAG ATTCGCAAAG AGGGCAAAAC CGGGCGTGTG TATTACCCCG CGCCGTTTAT GACCAATGAA AACCTGGACA TGTATCAGGA TGCTTACGAT ATCGGTCCGG AAAAAATTAT TGATACCTAT GCCGAGGCCA CGCGCCACGT CGATCAAGGA CTGTCGCTCA CCCTGTTTTT CCCCGATACC GCCACGACCC GCGATATCAA CAAAGCGCAG ATCTATGCCT GGCGAAAAGG TATTAAGTCA CTGTATTACA TCCGGCTTCG CCAGTTGGCG CTGGAAGGTA CTGAAATTGA AGGCTGCGTA TCCTGCGCGC TATAA
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Protein sequence | MATTTPERVM QETMDYHALN AMLNLYDKAG HIQFDRDQQA IDAFFAAHVC PHSVTFASQH ERLETLVREG YYDDAVLARY DRAFVLRLFE HAHASGFRFQ TFLGAWKFYT SYTLKTFDGK RYLEHFEDRV TMVALTLAQG DETLATQLTD EMLSGRFQPA TPTFLNCGKQ QRGELVSCFL LRIEDNMESI GRAVNSALQL SKRGGGVAFL LSNLREAGAP IKRIENQSSG VIPVMKMLED AFSYANQLGA RQGAGAVYLH AHHPDILRFL DTKRENADEK IRIKTLSLGV VIPDITFRLA KENAQMALFS PYDIQRRYGK PFGDIAISER YDELIADPHV RKTYINARDF FQTLAEIQFE SGYPYIMFED TVNRANPIAG RINMSNLCSE ILQVNSASRY DDNLDYTHIG HDISCNLGSL NIAHVMDSPD IGRTVETAIR GLTAVSDMSH IRSVPSIAAG NAASHAIGLG QMNLHGYLAR EGIAYGSPEA LDFTNLYFYT ITWHAVHTSM RLARERGKTF AGFAQSRYAS GDYFTQYLQD DWQPKTAKVR TLFARSGITL PTREMWLKLR DDVMRYGIYN QNLQAVPPTG SISYINHATS SIHPIVAKIE IRKEGKTGRV YYPAPFMTNE NLDMYQDAYD IGPEKIIDTY AEATRHVDQG LSLTLFFPDT ATTRDINKAQ IYAWRKGIKS LYYIRLRQLA LEGTEIEGCV SCAL
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