| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2990 |
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| Symbol | gabP |
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| ID | 6486771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2919651 |
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| End bp | 2921051 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642738306 |
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| Product | gamma-aminobutyrate transporter |
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| Protein accession | YP_002042035 |
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| Protein GI | 194444838 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.0706778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCAAT TGTCAGAATC ACATGCATTA GGGGGCGGGC TGAAATCACG CCACGTCACC
ATGTTATCGA TCGCCGGCGT CATCGGCGCC AGCCTGTTTG TCGGTTCCAG CGTGGCGATT
GCGGAGGCCG GCCCTGCGGT ACTGCTGGCC TATCTGTTCG CAGGACTTTT AGTCGTCATG
ATTATGCGAA TGCTGGCTGA AATGGCCGTC GCCACACCGG ATACCGGATC TTTTTCCACC
TATGCGGATA AAGCGATCGG CCCCTGGGCC GGGTATACCA TCGGCTGGTT ATACTGGTGG
TTTTGGGTGC TGGTTATTCC GCTGGAGGCC AATATTGCCG CCATTATTCT GAATTCATGG
ATACCGGGTA TTCCGGTATG GCTATTTTCA TTAGTGATTA CGCTTGCCTT AACCGGGAGC
AATTTATTGA GCGTCAAAAA TTACGGCGAG TTCGAATTCT GGCTGGCGCT ATGTAAAGTG
ATTGCTATCC TGGCGTTTAT CGCGCTGGGC GCGACGGCGA TTAGCGGTTT TTATCCGTAT
GCCGAGGTAA GCGGTATCTC CCGGCTCTGG GATCACGGCG GTTTTATGCC TAACGGCTTC
GGCGCGGTGT TAAGCGCCAT GTTGATCACC ATGTTCTCTT TTATGGGCGC GGAAATCGTC
ACTATTGCTG CCGCGGAATC CGATACGCCG GATAAACATA TCGTACGCGC CACCAATTCT
GTTATCTGGC GAATTTCCAT CTTTTACCTG TGTTCCATTT TTGTGGTGGT GGCGCTGATC
CCGTGGAATA TGCCGGGTCT GAAAAGCGTA GGTTCGTACC GTTCGGTACT GGAGCTGCTT
CATATTCCGC ACGCAAAATT CATTATGGAC TGCGTGATTT TGTTGTCGGT GACCAGTTGT
CTGAACTCCG CATTATATAC CGCGTCCCGG ATGCTCTATT CCCTTAGCCG CCGCGGCGAT
GCGCCTGCGA TAATGGGAAA AACTAACCGT AGCAAAACGC CCTGGGTGGC GGTTCTCCTC
TCTACCGGCG CGGCGTTTTT AACCGTTATC GTCAATTATT ACGCCCCGGC AAAAGTGTTT
AAATTTCTTA TCGACAGTTC CGGCGCCATC GCGCTGCTGG TCTATCTGGT GATTGCGATT
TCGCAATTGC GGATGCGTAA AATTCTGCTG GCACAGGGCG GAGAAATTAA GTTGAAAATG
TGGCTTTATC CGTGGCTCAC CTGGCTGGTT ATCGGCTTTA TCTGCTTTGT TCTGGTGGTG
ATGCTATTTC GACCGGCACA GCAACTGGAA GTCATTTCGA CGGGGCTGTT AGGGCTGGGC
ATAATAGGTA CTGTCCCCAT TATGTCTCGC TGGAAAAAAC TGATAAGGTG GCAAAAAGCC
CCCCTGCAAA ACCTACGTTA G
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| Protein sequence | MGQLSESHAL GGGLKSRHVT MLSIAGVIGA SLFVGSSVAI AEAGPAVLLA YLFAGLLVVM
IMRMLAEMAV ATPDTGSFST YADKAIGPWA GYTIGWLYWW FWVLVIPLEA NIAAIILNSW
IPGIPVWLFS LVITLALTGS NLLSVKNYGE FEFWLALCKV IAILAFIALG ATAISGFYPY
AEVSGISRLW DHGGFMPNGF GAVLSAMLIT MFSFMGAEIV TIAAAESDTP DKHIVRATNS
VIWRISIFYL CSIFVVVALI PWNMPGLKSV GSYRSVLELL HIPHAKFIMD CVILLSVTSC
LNSALYTASR MLYSLSRRGD APAIMGKTNR SKTPWVAVLL STGAAFLTVI VNYYAPAKVF
KFLIDSSGAI ALLVYLVIAI SQLRMRKILL AQGGEIKLKM WLYPWLTWLV IGFICFVLVV
MLFRPAQQLE VISTGLLGLG IIGTVPIMSR WKKLIRWQKA PLQNLR
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