| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2989 |
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| Symbol | gabT |
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| ID | 6484830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2918238 |
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| End bp | 2919521 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642738305 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_002042034 |
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| Protein GI | 194446692 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.0883038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCA ATAACGCTTT AATGCAGCGC CGTCATAACG CCGTTCCTCG CGGCGTGGGC
CAGATTCACC CAATTTTCGC CGAGCGGGCG GAAAATTGTC GGGTCTGGGA TGTCGAAGGC
CGTGAGTATC TCGATTTCGC GGGCGGCATT GCCGTCCTGA ACACCGGTCA TTTACATCCG
GGCATTGTTT CAGCGGTCGA AGCGCAGTTG AAGAAATTGT CGCATACCTG TTTTCAGGTG
CTGGCCTATG AACCGTACCT GGCGTTGTGC GAACGCATGA ACCAGAAGGT ACCGGGCGAT
TTCGCCAAAA AAACGTTGCT GGTCACGACC GGTTCAGAAG CGGTTGAAAA CGCGGTGAAA
ATCGCCCGCG CGGCGACAAA ACGCAGCGGC GCTATCGCGT TTAGCGGCGC TTACCACGGT
CGTACCCACT ACACGCTCTC TCTGACCGGG AAAGTACACC CGTACTCTGC TGGTATGGGA
TTGATGCCAG GCCATGTCTA CCGCGCGCTT TATCCTTGCC CGCTACACAA CATCAGCGAC
GACGACGCGA TCGCCAGCAT TGAACGCATC TTTAAAAATG ATGCCGCGCC GGAAGATATC
GCCGCCATTA TTATTGAGCC GGTACAGGGC GAAGGCGGAT TTTACGCCGC CTCTCCCGCG
TTTATGCAGC GACTGCGCGC GCTATGCGAC CAACACGGCA TTATGTTGAT TGCCGACGAA
GTGCAAAGCG GCGCGGGCCG GACCGGTACG CTGTTCGCCA TGGAACAGAT GGGCGTTGCG
GCAGATATTA CCACGTTTGC GAAATCGATC GCCGGCGGCT TTCCGCTGGC AGGCGTTACC
GGCCGGGCAG ACGTGATGGA CGCTATCGCG CCGGGCGGTC TGGGCGGCAC CTATGCCGGA
AACCCGATTG CCTGCGCCGC CGCGCTGGCG GTACTGGACA TTTTCGAGCA GGAAAATCTA
CTGCAAAAGG CAAATACGCT TGGCAACACG CTGCGCGATG GCCTGATGGA GATAGCGGAA
ACGCACCGTG AGATTGGCGA CGTGCGCGGA CTGGGCGCCA TGATCGCCAT TGAGTTGTTC
GAAAATGGCG ACCCCGGCAA ACCGAACGCG ACTCTGACCG CCGACATTGT GGCCCGCGCC
CGCGAGAAAG GGTTAATTCT GCTCTCCTGC GGTCCTTACT ACAACATCTT GCGCATCCTC
GTTCCACTCA CTATTGAGGC CTTGCAGATT CGGCAAGGCC TGGAGATTAT CGCCCAGTGC
TTTGATGAGG CGAAACAAGC GTAA
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| Protein sequence | MNTNNALMQR RHNAVPRGVG QIHPIFAERA ENCRVWDVEG REYLDFAGGI AVLNTGHLHP
GIVSAVEAQL KKLSHTCFQV LAYEPYLALC ERMNQKVPGD FAKKTLLVTT GSEAVENAVK
IARAATKRSG AIAFSGAYHG RTHYTLSLTG KVHPYSAGMG LMPGHVYRAL YPCPLHNISD
DDAIASIERI FKNDAAPEDI AAIIIEPVQG EGGFYAASPA FMQRLRALCD QHGIMLIADE
VQSGAGRTGT LFAMEQMGVA ADITTFAKSI AGGFPLAGVT GRADVMDAIA PGGLGGTYAG
NPIACAAALA VLDIFEQENL LQKANTLGNT LRDGLMEIAE THREIGDVRG LGAMIAIELF
ENGDPGKPNA TLTADIVARA REKGLILLSC GPYYNILRIL VPLTIEALQI RQGLEIIAQC
FDEAKQA
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