| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2980 |
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| Symbol | |
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| ID | 6485335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2908999 |
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| End bp | 2910414 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642738296 |
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| Product | tricarboxylic transport regulatory protein |
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| Protein accession | YP_002042025 |
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| Protein GI | 194445869 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.675571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGGG TTAAGCCGCA ATCGTTGTAC CTGCAACTCT TACTGTTCCT GGGGTTGCCG
CTGATTCTGC TATGGGGGCT GTCGGCGTTT AACAGTTATG TCAATGCGCT ACAGGCCGCC
ACTCAGGCTT ATGATCGTAC ATTGCTCTCC TCGGCGCGAA CGGTATCGGA ACGGCTGGTG
GTGCGCAATA ACCATCTGGA AGTTAACGTG CCCTGGGTGG TGCTGGATAG CTTCGAGCTT
AATATGAATG ATCGACTCTA TTACAAAGTC GTCGACCCTT CCGGAAAGGT CATTTCCGGT
TATGACGATC TGCCTGCCAT GCCGCCCGCT ACGCCCCGTA CCCGGCTTTA TCCGGCGCTG
GCGTGGTTCT ATCATACCGA GTATCGCGGC GAGGCGATCC GCGTGGCGCG TTTGCTACAG
CCGGTCAACG AAGGCGGCAT TATCGGCATG GCGGAGATTT ATGTCGCAGA GACGCTGCAG
TCCCGTCGTT ATCTGGCGGG CCAACTGCTG TTCTCTTCCT GGATCTCACA GGGTCTGCTG
GTGCTGCTAA CCCTGGTGCT GGTTGGCTGG TTATTACGCC GGATCCTGCG CCCTATGCGT
CAACTTTCGT CATTAATGGT ACGCCGCGAA CCGGGTCTGT TAACGCCGCT GCCGGAACTG
CTGCCGTGGT CGGAAACACG CTTGTTAATC GTGGCGTTTA ATCGCTACAT TGACAGGCTC
CGCGGCATCC TTTCCCGGCA GGAACGCTTT AGTGCCGATG CTTCTCACCA GTTAAAAACG
CCGCTGGCGG TGTTAAAAAC GCAGGCGGCG GTGGCGTTAG CCAGCCAGCA CCCTCATCAC
TGGTACGAAA GTCTGCAGGC GATGAGCGTA ACGCTGGATA GTACCATTCA GCTCACGGAA
AGATTGTTGC AACTTTCTGC GGTAAAGCAT AAAGAGCAGG GCGAGCGGCG CTTTTCACCG
GTGAATCTGT ACGATATCGT ACAGAGCGGC TGCTTTACCC GCCTGGCGCA GGCGCGGAGT
AAACATATCG ACCTGGGCTA CGAAGGCGAA CAGGAAGCGA TGTGGATCGA GGGGGATGAG
GTACTGCTTA GCGAGCTATG CGGAAACTTG CTGGATAATG CGCTGAAATA CACGCCTGAG
CAAGGCATCG TCACCGCGCG GCTTGAACGG GATGGCGATG CCGTGACGCT GGTTGTCGAA
GATAGCGGCC CCGGCATTGA TGATGAACAC ATCCATCTGG CGCTACAGCC GTTCCACCGG
CTCGATAACG TAGGAAATGT GGCCGGGGCG GGCATTGGTC TGGCTTTGGT CAATGATATC
GCACGCCTGC ACCGTACTCA TCCCCATTTT TCCCGTAGCG AAGCGTTGGG AGGGTTATAC
GTTCGGATAC GCTTTTTAAG CCTTGTCCCG CAGTAA
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| Protein sequence | MKWVKPQSLY LQLLLFLGLP LILLWGLSAF NSYVNALQAA TQAYDRTLLS SARTVSERLV
VRNNHLEVNV PWVVLDSFEL NMNDRLYYKV VDPSGKVISG YDDLPAMPPA TPRTRLYPAL
AWFYHTEYRG EAIRVARLLQ PVNEGGIIGM AEIYVAETLQ SRRYLAGQLL FSSWISQGLL
VLLTLVLVGW LLRRILRPMR QLSSLMVRRE PGLLTPLPEL LPWSETRLLI VAFNRYIDRL
RGILSRQERF SADASHQLKT PLAVLKTQAA VALASQHPHH WYESLQAMSV TLDSTIQLTE
RLLQLSAVKH KEQGERRFSP VNLYDIVQSG CFTRLAQARS KHIDLGYEGE QEAMWIEGDE
VLLSELCGNL LDNALKYTPE QGIVTARLER DGDAVTLVVE DSGPGIDDEH IHLALQPFHR
LDNVGNVAGA GIGLALVNDI ARLHRTHPHF SRSEALGGLY VRIRFLSLVP Q
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