Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2967 |
Symbol | |
ID | 6485462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2891481 |
End bp | 2892047 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642738284 |
Product | DNA-invertase hin |
Protein accession | YP_002042013 |
Protein GI | 194444172 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0000835062 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTACTA TTGGGTATAT TCGGGTGTCA ACAATTGACC AAAATATCGA TTTACAGCGT AATGCGCTTA CTAGTGCAAA TTGTGACCGC ATTTTTGAAG ACCGTATCAG TGGCAAGATT GCAAACCGCC CCGGCCTGAA ACGGGCGTTA AAGTATGTAA ATAAAGGCGA TACTCTTGTC GTCTGGAAAT TAGACAGACT GGGCCGTAGC GTGAAAAATC TGGTGGCGTT AATATCAGAA TTACATGAAC GTGGAGCTCA CTTCCATTCT TTAACCGATA GTATTGATAC CAGTAGCGCG ATGGGGCGAT TCTTTTTTCA TGTAATGTCA GCACTGGCCG AGATGGAGCG AGAATTAATC GTCGAGCGAA CCCTTGCCGG ACTGGCTGCC GCCAGAGCGC AAGGACGACT GGGAGGGCGC CCTCGGGCGA TCAACAAACA TGAACAGGAA CAGATTAGTC GGCTATTAGA GAAAGGCCAT CCTCGGCAGC AACTAGCTAT TATTTTTGGT ATTGGCGTAT CTACCTTATA CAGATATTTT CCGGCAAGCC GCATAAAAAA CGAATGA
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Protein sequence | MATIGYIRVS TIDQNIDLQR NALTSANCDR IFEDRISGKI ANRPGLKRAL KYVNKGDTLV VWKLDRLGRS VKNLVALISE LHERGAHFHS LTDSIDTSSA MGRFFFHVMS ALAEMERELI VERTLAGLAA ARAQGRLGGR PRAINKHEQE QISRLLEKGH PRQQLAIIFG IGVSTLYRYF PASRIKNE
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