Gene SNSL254_A2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2967 
Symbol 
ID6485462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2891481 
End bp2892047 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content47% 
IMG OID642738284 
ProductDNA-invertase hin 
Protein accessionYP_002042013 
Protein GI194444172 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0000835062 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTACTA TTGGGTATAT TCGGGTGTCA ACAATTGACC AAAATATCGA TTTACAGCGT 
AATGCGCTTA CTAGTGCAAA TTGTGACCGC ATTTTTGAAG ACCGTATCAG TGGCAAGATT
GCAAACCGCC CCGGCCTGAA ACGGGCGTTA AAGTATGTAA ATAAAGGCGA TACTCTTGTC
GTCTGGAAAT TAGACAGACT GGGCCGTAGC GTGAAAAATC TGGTGGCGTT AATATCAGAA
TTACATGAAC GTGGAGCTCA CTTCCATTCT TTAACCGATA GTATTGATAC CAGTAGCGCG
ATGGGGCGAT TCTTTTTTCA TGTAATGTCA GCACTGGCCG AGATGGAGCG AGAATTAATC
GTCGAGCGAA CCCTTGCCGG ACTGGCTGCC GCCAGAGCGC AAGGACGACT GGGAGGGCGC
CCTCGGGCGA TCAACAAACA TGAACAGGAA CAGATTAGTC GGCTATTAGA GAAAGGCCAT
CCTCGGCAGC AACTAGCTAT TATTTTTGGT ATTGGCGTAT CTACCTTATA CAGATATTTT
CCGGCAAGCC GCATAAAAAA CGAATGA
 
Protein sequence
MATIGYIRVS TIDQNIDLQR NALTSANCDR IFEDRISGKI ANRPGLKRAL KYVNKGDTLV 
VWKLDRLGRS VKNLVALISE LHERGAHFHS LTDSIDTSSA MGRFFFHVMS ALAEMERELI
VERTLAGLAA ARAQGRLGGR PRAINKHEQE QISRLLEKGH PRQQLAIIFG IGVSTLYRYF
PASRIKNE