Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2964 |
Symbol | |
ID | 6486153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2886088 |
End bp | 2888421 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642738281 |
Product | bacteriophage P4 DNA primase |
Protein accession | YP_002042010 |
Protein GI | 194442419 |
COG category | [R] General function prediction only |
COG ID | [COG3378] Predicted ATPase |
TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0000273638 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATGA ACGTAACGGA AACCGTAAAA CAGGCCTGCG GTCACTGGCC GCGTATTCTC CCGGCGCTGG GGGTGAAGGT GATTAAAAAC CGCCATCAGT CCTGCCCGGT GTGCGGTGGC TCTGACCGTT TTCGCTTTGA CGATAAAGAG GGGCGCGGGA CGTGGTTCTG CAATCAGTGT GGCGCAGGTG ACGGGCTTAA GCTGGTTGAG AAAGTGTTCT GCGTAACCGC ATCAGAGGCC GCCCAAAAGG TGAATGCCGT GACCGGCAAC CTGCCACCGG TTGCCCCGGA AATGATTGCG GCCGCAAAAG CCGGAACGGA GACCGACCAC AAAGCGGCGG CCGCACTGGC CGTCAGGCTC ATGGAGAAAA CCCAACCGGC CACCGGCAAC GCCTATCTTA CCCGAAAAGG TTTCCCCGCT CTGGAATGTC TGATGCTCAC AGCCATACAT AAAACCGGCG GCGTGACGTT CCGCGCCGGT GATGTGGTTG TCCCGCTGTA TGACGATACC GGGGCGCTGG TTAACGTTCA GCTTATTAAT GCTGATGGTC TCAAACGCAC CCTGAAAGGC GGTCAGGTCA AAGGGGCATG TCATATCATT GAGGGGCAGA AACAGCCCGG AAAACGCCTG TGGATTGCGG AGGGTTATGC GACCGCGCTC ACCGTGCATC AACTGACCGG CGAAACCGTC ATGGTGGCGC TGTCGTCTGT GAACCTCCTT TCTCTGGCAG GCCTTGCCCG GCAAAAGCAC CCTGCCTGTC AGATTATTCT CGCCGCCGAC CGTGACCTCA ACGGCGACGG CCAGAGCAAA GCCGCTGCGG CCGCAGGAGC CTGTGAGGGC ATTGTCGCCC TGCCGCCGGT GTTCGGTGAC TGGAATGATG CGTTTGTGCA GAAAGGCGAG GAGGCCACGC GGAAAGCCAT TTATGACGCC ATCCGGCCAC CGGCTGACAG CCCTTTCACT ACCATGAGCG AGGCGGAATT TACCGCCATG AGCACCAGTG AAAAGGCAAT GCGGGTGCAT GAGCATTACG GCGAAGCGCT GGCCGTGGAC GCGAACGGTC AGCTCCTGTC CCGCTATGAG GCCGGGATAT GGAAAATCAT TCCACCGTCA GACTTTGCCC GCGACGTGGC CGGGTTATTT CAGCGTCTGC GCGCCCCGTT CTCGTCGGGG AAAATAGCCT CAGTGGTGGA GACCCTGAAA CTGATTATTC CGCAGCAGGA CACCCCGGCA CGGCGTCTGA TTGGCTTTCG CAATGGCGTA CTCGATACCG CCACCGGCAC ATTCAGCCCG CACCATAAAT CGCACTGGCT GCGCACACTC TGTGATGTCG ATTTTACCCC GCCGGTGGAG GGTGAAACGC TGGAAACCCA CGCCCCGGAT TTCTGGCGCT GGCTCGACCG TGCCGCCGGT GGCAGACAGG AAAAACGCGA CGTGATACTT GCCGCCCTGT TTATGGTGCT GGCGAACCGC TACGACTGGC AGCTCTTTCT TGAGGTGACC GGGCCGGGTG GCAGTGGCAA AAGTATTCTG GCCGAAATTG CGACCATGCT TGCCGGGGAA GATAACGCCA CATCGGCCAC CATCGAAACG CTGGAATCAC CACGTGAACG TGCTGCGCTG ATTGGCTTCT CGCTGATTCG TCTGCCTGAC CAGGAAAAGT GGAGCGGTGA CGGGGCAGGA CTCAAGGCCA TCACCGGCGG TGATGCGGTC TCCGTTGACC CGAAATATAA GGATGCGTAC TCAACCCATA TCCCGGCGGT GATTCTGGCC GTGAACAACA ACCCGATGCG CTTCACCGAC CGCAGCGGCG GTGTTTCCCG TCGCCGGGTG ATCCTGCATT TCCCGGAACA GATTGCCCCG GATGAACGCG ACCCGCAGCT TAAGAACAAA ATCGCCCGCG AGCTGGCCGT GATTGTGCGC CAGCTAATGC AGAAGTTCAG CGACCCGATG ACTGCCCGCG CACTGCTCCA GTCACAGCAG AACTCCGACG AAGCGCTCAG TATTAAACGT GAAGCCGACC CGACATTTGA TTTTTGTGGC TATCTGGAGG CGTTGCCGGA GCCTGAGGGG ATGTATATCG GTAATGCCAG CATCATTCCG CGTCAGCCGC GCCTGTATCT GTATCATGCC TATCTGGCGT ATATGGAAGC CCACGGCTAC AGGAATACAC TCAGCCTCAC CATGTTCGGT AAGGGATTGC CAGCCATGTT GAAAGAGTAC GGGCTGAGTT ATGAGAAGCG CCGGAAAAAT CAGGGCATAC AAACCAATCT CGCGCTAAGA GAGGAAAGCA ACGCCGACTG GCTGCCGAAA TGTGATGAAC CCATAGCGAA ATAA
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Protein sequence | MKMNVTETVK QACGHWPRIL PALGVKVIKN RHQSCPVCGG SDRFRFDDKE GRGTWFCNQC GAGDGLKLVE KVFCVTASEA AQKVNAVTGN LPPVAPEMIA AAKAGTETDH KAAAALAVRL MEKTQPATGN AYLTRKGFPA LECLMLTAIH KTGGVTFRAG DVVVPLYDDT GALVNVQLIN ADGLKRTLKG GQVKGACHII EGQKQPGKRL WIAEGYATAL TVHQLTGETV MVALSSVNLL SLAGLARQKH PACQIILAAD RDLNGDGQSK AAAAAGACEG IVALPPVFGD WNDAFVQKGE EATRKAIYDA IRPPADSPFT TMSEAEFTAM STSEKAMRVH EHYGEALAVD ANGQLLSRYE AGIWKIIPPS DFARDVAGLF QRLRAPFSSG KIASVVETLK LIIPQQDTPA RRLIGFRNGV LDTATGTFSP HHKSHWLRTL CDVDFTPPVE GETLETHAPD FWRWLDRAAG GRQEKRDVIL AALFMVLANR YDWQLFLEVT GPGGSGKSIL AEIATMLAGE DNATSATIET LESPRERAAL IGFSLIRLPD QEKWSGDGAG LKAITGGDAV SVDPKYKDAY STHIPAVILA VNNNPMRFTD RSGGVSRRRV ILHFPEQIAP DERDPQLKNK IARELAVIVR QLMQKFSDPM TARALLQSQQ NSDEALSIKR EADPTFDFCG YLEALPEPEG MYIGNASIIP RQPRLYLYHA YLAYMEAHGY RNTLSLTMFG KGLPAMLKEY GLSYEKRRKN QGIQTNLALR EESNADWLPK CDEPIAK
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