Gene SNSL254_A2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2960 
Symbol 
ID6486487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2884712 
End bp2884978 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content59% 
IMG OID642738277 
Productphage DNA binding protein 
Protein accessionYP_002042006 
Protein GI194446612 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.630956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00000157452 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACACCG CTTTTTCTTC CCCGTCTTCT GCCCCTGCCG CGCCGCTGAT GCCGGTCTCT 
GATACCGTTC ATGAGCGCTT TATCCGTCTG CCCGAAGTGA TGCATCTGTG CGGCCTGTCC
CGGTCGACGA TTTATGACCT CATCAGCCGG GAGGCTTTCC CGAAACAAAT CAGCCTGGGC
GGTAAAAACG TGGCGTGGGC GCAGTCTGAA ATCACCGCTT GGATGGCGGA TCGCATTGCC
GAACGCAACC GGGGCTATGA CGCATGA
 
Protein sequence
MHTAFSSPSS APAAPLMPVS DTVHERFIRL PEVMHLCGLS RSTIYDLISR EAFPKQISLG 
GKNVAWAQSE ITAWMADRIA ERNRGYDA