Gene SNSL254_A2954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2954 
Symbol 
ID6482792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2880633 
End bp2882402 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content33% 
IMG OID642738271 
Producthypothetical protein 
Protein accessionYP_002042000 
Protein GI194443820 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0000000000103337 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGAAT TAAACATTGG TAAAGTTACA CAAGTAAAAG GAACCACTGT CAAGGCAAAA 
ATAAACCATG ACTTATACCA ATCTACATAT TTTCACAATG GAAAAATACT TCGTGGCATA
TCTATAAATG AATTTGTGTT AGTCCGAAAA GGTTATCAGG ATATAGTAGG CAAGATCATT
GGCGAGGAAA TTGTTGAGAA TTTTAATATT AGAATCGATG ATATTGAACA AAAAAAATAT
GAAAGATTTG TTGAACTTAA TATTCTCGGT TATTTTTTTG AAGGGAAGTT TTTCTCTGGC
ATAAAATACC TTCCAATGAT AAATGATAGA CTGTATTTGA TTTCTGATGA TAAAATATCT
GAGATATACA GCTTTAGCAA AAACACTAAA ACCCCACTTA TTAACATTGG GAGGTCCATG
TTAGAGGAAT TACCAATTAA CATCCCAATA AATGGAGTTT TTAATTCTCA CATTGGGATT
TTTGGAAATA CTGGGAGTGG AAAATCAAAT ACTTTAGCAA AATTATATCA ATCACTTATC
AATCGAATTG ACAACATAGA ACTATTTAGT AGCAAATCAA AATTTGTCTT AATTGATTTC
AATGGGGAAT ATGGGACTCT TGAGAATTCC TTTCCAGAAC TGTGTCAATC AATAAAGCTT
AGTACAAAAA AAGATAGTGG TAAAATTCAT TTCGGAGAAA AAGAGTTTTG GGATGATGAA
CTATTATCAG TGCTATTCTC AGCAACTGAA AAAACACAAA AGCCATTCTT AACCCATCTA
ATAAAGAGCA AGTTAAAATA TGATGATGAC CTTGGTGAGT ATCTAAAAAG AACTATTAAA
ATAATGTTTG GCACTAATCC TCACAAAGAG ACAGTTAATT TACTTAAAAG CCTAATACCT
TATTTTGAGG AAGGTGATCA ACAAAAAATA ATAGACGAAC TGTCTCTATT TACTTGGCAT
TCAGGTCAAG ATAAGTATAC ACACCCTGAT AGCTGGCTCG ATAACACAAC TGAAGTTATG
CAACACACTC AAGCTACATA CAACAGCAAT TTCAATGTCA CCAGTGTATT TGATGAAATT
GCTATACGTG CGACACTACA ACTAATAAAC TCAGTCTCCA GAAACTATGT CCAATATGAT
CATATATATC CACTAATAAA TAAAATAATA GCTATGAGCT CATCTTTGGC TAAAGTCATA
GAAATTAATG ATGTTCAGCA AAATAATAAA CCCATATCAA TAATATCCCT TAAAGAATGC
AATCAGTCCA TAAAAAAAAC CATTCCAATG ATGATTGCAA AATGTTCTTT CTTGGAACAC
AAGTCCTCTG ACAATAAGAT AGAAAGCTTT CATTTGATAA TAGATGAAGC TCACAACATC
CTATCTGAAA GCTCTGTAAG AGAAGCTGAA ACGTGGAAAG ACTACAGATT AGAGTTGTTT
GAGGAAATAA TAAAAGAAGG CAGAAAATTT GGCTATTTTG TCACTATTTC AAGCCAGCGA
CCATTTGATA TATCGCCAAC TATCGTGTCA CAGTTACATA ATTATTTCAT CCATCGCTTG
GTAAATGAAA ATGATCTTTA TCTTCTTAAA AACACCTTAA GTACTTTGGA TGCAGCTTCC
AGAACGCTCA TACCAACGCT TCCTCCTGGT GCATGCATAA TTTCAGGAAC AGCTTTCCAT
ACTCCGCTGC TTGTGCAGAT CGATAGACTT GCTGAAGAGA GTGCCCCACA AAGTGACACG
CTTGATTTAG AGAATTTATG GGATCTTTAA
 
Protein sequence
MDELNIGKVT QVKGTTVKAK INHDLYQSTY FHNGKILRGI SINEFVLVRK GYQDIVGKII 
GEEIVENFNI RIDDIEQKKY ERFVELNILG YFFEGKFFSG IKYLPMINDR LYLISDDKIS
EIYSFSKNTK TPLINIGRSM LEELPINIPI NGVFNSHIGI FGNTGSGKSN TLAKLYQSLI
NRIDNIELFS SKSKFVLIDF NGEYGTLENS FPELCQSIKL STKKDSGKIH FGEKEFWDDE
LLSVLFSATE KTQKPFLTHL IKSKLKYDDD LGEYLKRTIK IMFGTNPHKE TVNLLKSLIP
YFEEGDQQKI IDELSLFTWH SGQDKYTHPD SWLDNTTEVM QHTQATYNSN FNVTSVFDEI
AIRATLQLIN SVSRNYVQYD HIYPLINKII AMSSSLAKVI EINDVQQNNK PISIISLKEC
NQSIKKTIPM MIAKCSFLEH KSSDNKIESF HLIIDEAHNI LSESSVREAE TWKDYRLELF
EEIIKEGRKF GYFVTISSQR PFDISPTIVS QLHNYFIHRL VNENDLYLLK NTLSTLDAAS
RTLIPTLPPG ACIISGTAFH TPLLVQIDRL AEESAPQSDT LDLENLWDL