Gene SNSL254_A2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2918 
Symbol 
ID6483851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2853722 
End bp2855827 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content52% 
IMG OID642738235 
Productgp19 
Protein accessionYP_002041964 
Protein GI194443010 
COG category[R] General function prediction only 
COG ID[COG5301] Phage-related tail fibre protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.217612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00000000528807 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCACAGA CAACAATTAC ACTGGCATTT GAACAGTGGA AAGCGCAACA GGGTGCCACG 
GGGGAGCCTG TCCTGCTGGA TGAATTTGTG TTCGCTAACG TACCGGGACT TGATCCGGAT
CAGCCGGTTG ACCGCAATGA AACCCTGCCA CCGGCTGAAC AGATTGTTCA CCGGCAGGCC
GTCAGCCGTA AGGGTGTGGT GAATGACAAC GCCGTGGTGC ATTCCGTCGT ACTGGGGGCG
GACGTGGGGG ATTTTTCCTT TAACTGGATT GGATTGCTGA ATAAAGCCAG CGGTACGCTG
GCAATGATTG TTCATGCGCC ATTACAGCAA AAACTTAAAA CAGCTGAAGG GCAACAGGGG
AACGTGCTTA CGCGCTCGTT TCTGATGGAA TATAACGGCG CACAGGCTGA AACCGGAATT
AATACGCCTG CTGAGACCTG GCAGATTGAC TTTACCGCAC GTATGGCCGG AATGGACGAG
CGCCAGCGCC TGGAAAATAT CGACATCTTC GGGGCGGCGG CGTTTTTTGG TGACGGCTAT
CTGGTCGGGA AAAGCGGGAA TCAGTTTTAT GTGACCAAAG GTACCGGCTA TGTGGCAGGG
CTGCGCACAA CGCTTGCAGA AAACCTGAAT ATTACCGTGA CAACCAGGCC GGTCAAAGTC
TGGCTGGATG TATGCTGGAC AGGAACGCTT ACCAGCGTGT GGGGTGTGCA GTCCCGTATT
ACGGTTGCTG ACAACCTGGC GGATTATGTG CAGAACGGCG TACAGCATTA TGTGTTTGCG
GTGGCGGGTA TTGATGAAAA CGGCAATATT ACGGATTTAC GCCCGAAAGG GACGCTGAAT
GAGCAGCAGG CCAGCGATGC GCTGAGAAAA CATGAACAAT CCCGTAACCA TCCGGACGCC
ACAACCCGCG AAAAAGGGTT TGTGCAGTTA AGCAGTGATA CGAACAGTGA GTCGGAGATG
CTGGCCGCAA CGCCGAAAGC GGTTAAAGCG GCTATGGATA ATGCGAACGG GCGTGTCCCG
TCAGACCGTA AGGTCAATGG GCATCCATTA TCCGGGGATA TCACCCTGTG GGCGTCAGAT
GTGAAGGCTA TTTCCGCCGA TGCCATTGGA CAGATTACCG ATAACGGCAC GATGGCATCA
GCTAATACTC CAGGATGGTG GCGGGTGGCG GTGTCGAATT CTGATACGGT CGCTGATTTT
CCGGCCTATC CGGATGGCAG CAAGCTGTAC AGCTACGGAT ATATGTTTGT TGAGAAAATC
GGGGAAGTCT GGTTTCAGCA CTATTACGCG CATATGGGCG CGAACGCAAA GCGCCAGGAC
TGGGGAACGG TACCGAATAC CAGCCGCCCG TGGGTTATTG ACTACAACAC CGCAAATAAA
CCTTCAGCCG GTGATGTGGG TGCATTGCCG ATTACCGGGG GGCGGATTAA TGGGTCTTTA
GGAATTGGTG CTGATAATGC GCTTGGTGGT AATTCGATTG TATTCGGCGA TAACGATACA
GGGTTTAAGT GGCACAGTGA CGGCGTTCTG GGGATTTATG CCAATAATGC TCTGGTTGGT
TATATCGACA ATTCCGGGCT GCACATGTCA GTAGATGTTC TCACTAATGG TGCCGTACGC
GCAGGCAACG CAAAAAAACT GTCACTGACG AGCAATAATA ATTCGACAAT GACAGCCACG
TTTAATTTAT GGGGCGACGC AAACAGGCCA ACAGTTATTG AACTGGACGA CGATCAGGGA
TGGCATCTGT ACAGCCAGCG AAATCCTGAC GGTTCGATTG TCTTTACGGT CAATGGAGAT
ATCACCGCTA ACACGCTTCG TGCAGGCGGG GCTATCTATC AGAATAACGG CGACATCTTT
GGTTCGTTGT GGGGAAATGG CTGGTTAAGT ACCTGGATTC ACAACAATGT AGTAAAAGCG
GTCAGACTTG GCCCCGTGGC GCTTTCTGGC GGTCTGTGGC GTGATTTTCA GCTTGGCGGC
GGACAGGTGG TGACGGGGTT CCATACTGAC GGTAGCTGGG AAATGGAAGG TGATGATGAC
AAGGTTTATT ACCGTCCCAT TCAGTATCTG ATTGGTGATA CGTGGGTAAC AGCCCCAAGT
GTATAA
 
Protein sequence
MSQTTITLAF EQWKAQQGAT GEPVLLDEFV FANVPGLDPD QPVDRNETLP PAEQIVHRQA 
VSRKGVVNDN AVVHSVVLGA DVGDFSFNWI GLLNKASGTL AMIVHAPLQQ KLKTAEGQQG
NVLTRSFLME YNGAQAETGI NTPAETWQID FTARMAGMDE RQRLENIDIF GAAAFFGDGY
LVGKSGNQFY VTKGTGYVAG LRTTLAENLN ITVTTRPVKV WLDVCWTGTL TSVWGVQSRI
TVADNLADYV QNGVQHYVFA VAGIDENGNI TDLRPKGTLN EQQASDALRK HEQSRNHPDA
TTREKGFVQL SSDTNSESEM LAATPKAVKA AMDNANGRVP SDRKVNGHPL SGDITLWASD
VKAISADAIG QITDNGTMAS ANTPGWWRVA VSNSDTVADF PAYPDGSKLY SYGYMFVEKI
GEVWFQHYYA HMGANAKRQD WGTVPNTSRP WVIDYNTANK PSAGDVGALP ITGGRINGSL
GIGADNALGG NSIVFGDNDT GFKWHSDGVL GIYANNALVG YIDNSGLHMS VDVLTNGAVR
AGNAKKLSLT SNNNSTMTAT FNLWGDANRP TVIELDDDQG WHLYSQRNPD GSIVFTVNGD
ITANTLRAGG AIYQNNGDIF GSLWGNGWLS TWIHNNVVKA VRLGPVALSG GLWRDFQLGG
GQVVTGFHTD GSWEMEGDDD KVYYRPIQYL IGDTWVTAPS V