| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2906 |
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| Symbol | |
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| ID | 6482489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2842680 |
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| End bp | 2844860 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642738225 |
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| Product | protein secretion ABC efflux system permease and ATP-binding protein |
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| Protein accession | YP_002041954 |
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| Protein GI | 194446199 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.452451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.0897932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG CCGCCCCCGA TGTAGAAGAG GTACTCAGTG AGCGCGCGCT AAGCCAATGG
GCGCAGGCCA TCAGCTATGT CGCCGGTCAT TATCGCGTTG CCTGTTCTCC CGGTTCAATT
CAGGCCAACG CCCCGTGGTT TAGGGGTAAA AGCAGAACGA CCGCCTTAAC GCAGCTCGCG
CGGCAGGCGG GTTTATCCTT TCATGCGCCG GACATAGACA AAACGGCATT TAGTCAGTGG
CGATTGCCGT TGGTTGTCGA GCTCCGGGAC GGGCTGTTAT TGGTTATCGA ACATGTTAAT
GGCGAAGATG CGGTAGACGT TTTTGTGATT GAAGAAGAGG GTCAGCGTAA CCGCCTGACG
CTCAGCGAGT TATTGCCGGA GATCCTCTAT GTTGCCGCGC TACGCCCGCT ATCGGCGCTC
AAGGATAGCC GCGTCGACCG CTATATCTCC CGCTTTAAAC CCGACTGGAT GCGCGAGCTG
GTTCTGCAGG ATATTCGCCC TTATTTACCG GTAATGGTCG CCGCCTTTCT GATTAACGTG
CTGTCGCTGG CCGGGATTGT GTTCTCTATG CAGGTTTACG ATCGGGTGAT CCCCGCTCAG
TCATATCCTA CCCTGTACGT GCTCTCCTTC GGCGTGCTGG TAGCGGTGCT GTTCGGTTTT
CTGCTGCGTG AAGCGCGTAC GCACATTATG GACGTGCTCG GTAAACGCGC CGATATGCGC
ATTTCCGATC GGGTATTCGG TCATGCGTTA AGGCTGCGCA ACAGCGCTAT TCCCCGTTCC
ACAGGCAGTT TTATCTCGCA GTTACGCGAA CTGGAGCAGA TCCGCGAGAT GATTACCTCT
TCAACGCTGG CGACCATTGT CGATCTGCCT TTCTTTTTCC TGTTTATGAT AGTCCTGGCG
ATTATTGCCC CACCGCTGGC ATGGATAGCG CCCGTGGCGG CTCTGCTGAT GATCCTGCCG
GGCGTCGCAC TGCAAAAAAA ACTGGCTGTC CTCGCCAACC AGGCCGCCCA CGAAGCGACG
CTACGCAATG CAGTCTTGGT CGAAAGCGTT CAGGGGCTGG AAGATATTAA ACTGATGCAG
GCGGAGAACC GCTTTCTTCA GCAATGGAAT AGCTATATCC GTATTACCGG CGAGTCGGGT
CTACGCACCC GCAAACTCAC GCAAGGGCTT ATCAGTTGGG GGATGTCGGT ACAAAGTCTG
GTGTATGCCG CAGTGATTAT GTTCGGCGCG CCGATGGTCA TTGAAGGCAG TATGACTACC
GGCGCCGTGG TCGCCGCGTC GATGCTCGGC TCGCGGATGA TCGCGCCAAT GGCTAACCTG
TGCGGCGTGC TGGCGCGCTG GCAGCAGGTG AAAGCGGCGA AGATGGGTCT CGACAACATT
ATGCAACTGC CCACCGAGAC ACAGCATGAC GATAGCCTGA TACACCGCGA CATCCTCCAC
GGGCATTACT TCTTTGAAAA CGCTCAGTTT CGTTACCATA ACGACGATCA ACGCATACCG
TTGCGCCTCG TGCGTCTGGA GATCATGCCT GGCGAGCGGA TTGCGATACT GGGGCGTAAC
GGTGCGGGTA AATCCACACT TTTACAGGCG ATGGCGGGCG GCCTGGAGAT GATTCAGGGA
GATGCCCGGC TTGATAATCT CAGCTTGTCG CACATCGATA TGGCGGATTT ACGCCGCAAC
ATCGGCTTTC TTAGCCAGAA CGCGCGGCTT TTCTTCGGCA CCCTACGAGA GAACCTGACG
CTCGGCGCGC CGCACGCCAA CGATGAACAG ATTTTTGACG CGCTCGAAGT CAGCGGCGGC
GCCGTCTTCG TCAGGCGGCT GGCAAAAGGG TTGGATCATC CCATTATGGA GGGTGGTAAC
GGCCTGTCCG GCGGGCAGCG TCAGTCCCTG TTGCTGGCGA GAATGCTGCT GCGCTCCCCC
AATATTGTGC TACTTGACGA ACCCAGCGCC TCGCTGGACG AGCATACGGA ACGAGAGTTT
ATTCAGCGGT TACATCAGTG GCTTGGCAAT CGAACCCTGG TCGTCGCGAC GCACCGGGTA
CCAATACTGG AGCTGGTTGA GCGTGTCGTT GTCCTGAAAG AAGGACAACT GGTGATGGAT
GCGCCAAAAG CGCAGGCGCT TAACGCGGAT CGGATGCAAA GTCATCGTCG GGAGTGGAAA
AATGAAAATC AATCAGCATG A
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| Protein sequence | MTRAAPDVEE VLSERALSQW AQAISYVAGH YRVACSPGSI QANAPWFRGK SRTTALTQLA
RQAGLSFHAP DIDKTAFSQW RLPLVVELRD GLLLVIEHVN GEDAVDVFVI EEEGQRNRLT
LSELLPEILY VAALRPLSAL KDSRVDRYIS RFKPDWMREL VLQDIRPYLP VMVAAFLINV
LSLAGIVFSM QVYDRVIPAQ SYPTLYVLSF GVLVAVLFGF LLREARTHIM DVLGKRADMR
ISDRVFGHAL RLRNSAIPRS TGSFISQLRE LEQIREMITS STLATIVDLP FFFLFMIVLA
IIAPPLAWIA PVAALLMILP GVALQKKLAV LANQAAHEAT LRNAVLVESV QGLEDIKLMQ
AENRFLQQWN SYIRITGESG LRTRKLTQGL ISWGMSVQSL VYAAVIMFGA PMVIEGSMTT
GAVVAASMLG SRMIAPMANL CGVLARWQQV KAAKMGLDNI MQLPTETQHD DSLIHRDILH
GHYFFENAQF RYHNDDQRIP LRLVRLEIMP GERIAILGRN GAGKSTLLQA MAGGLEMIQG
DARLDNLSLS HIDMADLRRN IGFLSQNARL FFGTLRENLT LGAPHANDEQ IFDALEVSGG
AVFVRRLAKG LDHPIMEGGN GLSGGQRQSL LLARMLLRSP NIVLLDEPSA SLDEHTEREF
IQRLHQWLGN RTLVVATHRV PILELVERVV VLKEGQLVMD APKAQALNAD RMQSHRREWK
NENQSA
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