Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2886 |
Symbol | |
ID | 6483224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2816021 |
End bp | 2817241 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642738206 |
Product | hypothetical protein |
Protein accession | YP_002041935 |
Protein GI | 194443826 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.153308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGG AATTTTCTCT GTCCAGACCA ACATTTAAAC GCACACTACG GCGGATTAGT ATAATCAGCG TGCTGCTTAC AATGACATTG ATCTGGCTAT TAATTTGCGT TGCGTCTGTC CTTACGCTCA AACAGTATGC GCAAAAAAAT CTCGATTTGA CCGCCGCCAC AATGGCCCAT AGCCTTGAAG CGGCACTGGT ATTTTCCGAT AACGCGGCCG CAGCGGAAAC GCTCGCCACA CTGGGACGCC AGGGACAATT TTCAGCGGCG GAGGTCCGCG ATAAAAATGG CCGTACTATC GCCTCATGGC GCTATGATGC GCGAGCCGCA GACGATAAGC TCATCGGCTT AATTAGCCAC TGGCTTTTTC CATTGCCGGT ATCGCAACCC GTCTGGCACA ACGGCAGGGC CATCGGCGAA GTACGGCTTG TCGCCCGCGA CAGCCTTATT GGTCATTTTA TCTGGCTATC GCTGGCAGTG CTGACAGGAT GTATTCTGCT GGCATCCGGC ATTGCCCTGC TGCTCACGCG TTATTTGCAC AATGGCGTTG TGGATGCGCT GCAAAATATT ACTGAAGTTG TACACGACGT TCGCACTAAC CGAAATTTTT CACGCCGGGT ACCTGATGAG CGTATTGCGG AATTTCACCT GTTTGCGCAG GATTTCAATA GCCTTCTGGA TGAGATGGAA GAATGGCAGC TACGGCTTCA GGCTAAAAAT GCCCAGTTAC TACGTACCGC GTTGCACGAT CCGCTGACGG GGCTTGCCAA TCGCGCGGCA TTTCGCAGCT GTATTAACGC GCTGATGAAG GACAATTCCG CTCGTAGCAG TTCGGCATTG TTATTTCTGG ATGGCGATAA CTTTAAATAT ATTAATGATA CCTGGGGACA TGCGGCAGGC GACCGCGTAC TTATAGAGGT TGCCAAAAGA TTAGCGGAAT TCGGTGGTAG CCGTTATCAG ACTTACCGAC TCGGCGGCGA TGAATTTGCG ATGGTGCTTT ACGATGTACA TTCGGAATAT GAAGTACAAC GTATTTGCGC AGCGCTATCC CAGGCATTTA ATCGACCTTT TGAATTGCAT AACGGCCAGC GGATAACGAT GACCCTGAGT ATTGGCTTTG CGCTGACATG GGAACATGCC ACTGCCGAAA AACTACAAGA ACTGGCCGAT CGAAATATGT ATCAGGCTAA ACACCGGCGT GCGGAGCGCT CGCTAAACTA A
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Protein sequence | MNKEFSLSRP TFKRTLRRIS IISVLLTMTL IWLLICVASV LTLKQYAQKN LDLTAATMAH SLEAALVFSD NAAAAETLAT LGRQGQFSAA EVRDKNGRTI ASWRYDARAA DDKLIGLISH WLFPLPVSQP VWHNGRAIGE VRLVARDSLI GHFIWLSLAV LTGCILLASG IALLLTRYLH NGVVDALQNI TEVVHDVRTN RNFSRRVPDE RIAEFHLFAQ DFNSLLDEME EWQLRLQAKN AQLLRTALHD PLTGLANRAA FRSCINALMK DNSARSSSAL LFLDGDNFKY INDTWGHAAG DRVLIEVAKR LAEFGGSRYQ TYRLGGDEFA MVLYDVHSEY EVQRICAALS QAFNRPFELH NGQRITMTLS IGFALTWEHA TAEKLQELAD RNMYQAKHRR AERSLN
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