Gene SNSL254_A2859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2859 
Symbolung 
ID6484058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2788939 
End bp2789628 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content55% 
IMG OID642738181 
Producturacil-DNA glycosylase 
Protein accessionYP_002041914 
Protein GI194442686 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.721357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.53223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTG AGTTAACCTG GCACGATGTG CTGGCTGATG AGAAACAGCA ACCTTACTTT 
ATCAATACGC TTCACACTGT TGCTGGCGAG CGTCAGTCGG GTATCACGGT CTACCCGCCG
CAAAAAGATG TGTTTAACGC CTTTCGCTTC ACGGAACTGG GCGACGTTAA GGTGGTGATC
CTGGGACAAG ATCCTTACCA CGGCCCCGGC CAGGCACATG GTCTGGCGTT TTCCGTGCGT
CCTGGGATCG CTCCCCCGCC GTCATTAGTG AATATGTACA AAGAGCTGGA AGCCTCCATT
CCCGGCTTTG TCCGCCCCGC GCACGGTTAT CTGGAAAGCT GGGCACGCCA GGGCGTACTG
TTACTGAATA CGGTGCTCAC GGTACGGGCA GGCCAGGCGC ATTCTCATGC CAGCCTGGGG
TGGGAAACCT TTACGGATAA AGTGATAAGC CTGATTAACC AACACCGCGA AGGGGTCGTC
TTCCTGCTGT GGGGCTCGCA CGCCCAGAAG AAAGGCGCGA TTATTGATCC ACAGCGCCAC
CATATTCTGA AAGCTCCGCA TCCCTCGCCA CTCTCTGCTC ACCGCGGATT TTTTGGCTGT
AACCATTTTG CGCTAACGAA CCAATGGCTG GAACAACACG GCGAGAAAAC TATCGACTGG
ACGCCAGTAT TACCGGCTGA GAGTGAATAA
 
Protein sequence
MATELTWHDV LADEKQQPYF INTLHTVAGE RQSGITVYPP QKDVFNAFRF TELGDVKVVI 
LGQDPYHGPG QAHGLAFSVR PGIAPPPSLV NMYKELEASI PGFVRPAHGY LESWARQGVL
LLNTVLTVRA GQAHSHASLG WETFTDKVIS LINQHREGVV FLLWGSHAQK KGAIIDPQRH
HILKAPHPSP LSAHRGFFGC NHFALTNQWL EQHGEKTIDW TPVLPAESE