Gene SNSL254_A2842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2842 
Symbol 
ID6482242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2773287 
End bp2776214 
Gene Length2928 bp 
Protein Length975 aa 
Translation table11 
GC content53% 
IMG OID642738165 
Productgifsy-1 prophage RecE 
Protein accessionYP_002041898 
Protein GI194442704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.377327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.0706472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGAA CTAATCCTGT ATTTTTAGTC CGCAAAGCAA AGAAATCATC AGGCCAGAAA 
GACGCTGTAC TCTGGTGCAG TGATGATTTT GAAGCGGCAA ATGCAACACT GGATTATCTT
CTGATTAAAT CCGGTGCGAA GCTGAAAGAT TATTTCAAAG CTGTCGCTAC TAATTTCCCT
GTCGTTAACG AGCTGCCGCC GGAAGGCGAA CTGAGCCTCA CTTTCTGCGA TTACTATCAA
CTCGCTAAAG ACAATATGAC CTGGACGCAA ATCCCCGGCG TCACCCTGCC ATCATCTGAA
GCCGCCGCCG CGGCGCGCCA GCATATCGTC GATGGTGTTG ATACCGAAAC AGGCGAAGTG
CTGGAAGACC ACACCGAAAA TTTTGGTAAC GAAAGCAACA GCCCTGCCCA GGCAACAGCC
CCAGCCCCCG AGCTGACTGT TGTCGCAACT ATGCCTCTCC GTCACCGCGT TCTTGCTCAG
TACATAGGTG AAGGTGAGTA TCTTTATCAC GTCGACGCCT CCCAGAAAAA AGAAATTCTG
CGTCTCGAAA TGGACACCGA TAATTCATAT GTCCAGAACC TGCTGCTTGC CGCCGAGAAT
GTTGAAGCGT TCAAGAAAGC CATTGAACAT GACATTCACA AAATAGTGAA TGCCGTTAAA
AAAATATTCC CTGTCGATGG AAAAACTCCT GAACTGGCGA CTGTTATCCA GTTCCTTAAA
ACATGGTTCG AGACGGAGCA TATCGATCGC GGTTTGCTCG TTAAGGAGTG GGCGAAAGGC
AACCGTGTAT CGGCTATTCA ACGCACTGAA AGCGGCGCCA ACGCTGGCGG TGGCAATAAG
ACTGACCGTA ACCCTGATTA CGAATATACT CTCGATACTC TGGACGTAGA GATTGCAATG
GCCACTTTGC CTATGGACTT TAATATCTAT GAGCTACCTG GCAGCGTTTA CCGTCGCGCA
AAAGAAATCG TAAAGAAAAA GGAAAGTCCG TTCAAAGAAT GGTCCGCAGC ACTTCGCGCA
ACGCCCGGTA TCCTGGATTA TTCCCGCGCC GCTATTTTCG CGCTGATCCG AAGCGCGCAC
CCTGAGTTTT ATCACTACCC CGGACGCCTT CAGGGGTATA TCAACGCCAA CTTAACGGAG
ACTGATCACG AGAACCCCAC CGAGGAAGCT CTCACGGCTG CCCGACACAC TCCGGAAAAA
GACGCGGTAG AAGAAGCCAA CCGACAGCTT GCCGCCGCGC GCGGTGAATA TGTGGAAGGC
ATCAGCGACC CGAACGACCC AAAATGGGTG AAGACCGGGA CAAGCCAGCC GACCACCGAA
CCTGAACTGG TTAAAAATGT TGGCAACGGT ATTTTCGACG TGTCCGCTTT AATGCAGAAC
TCATCAACTC ATGGCACAGA AACGAATCCG GAGACCACCA GCAATGTGCA GGTTCAAAAA
GCTGACAGTG ATGAAAAACA GGCTGGTGAT GCGGTGCAGG CAGGCGAAGG CGATCTGGGT
ACTGGTAAAG AAGCAGTTAC CGTAGAGAAC CAGAATCAGG CTGAGACGCA CCAGAACAAC
GATTCTGTGA GCCAATCTGA ACCTGAGGCG CAACAAAACG TACCGGAATC GCAACAAGAA
GAGCCAGAAG CAGCCTGGCC GGAATACTTC GAGCCGGGCC GCTATGAAGG TGTACCAAAC
GAGGTTTACC ACGCCGCCAA CGGGATCAGC TCAACTCAGG TGAAAGATGC TCGCGTGTCG
CTGATGTACT TTAACGCGCG TCACGTAGAG AAGACTATCG TCAAAGAGCG CTCTCCAGTG
CTTGATATGG GCAACCTGGT ACATGTTCTG GCTCTACAGC CGGAAAACCT CGAAGCGGAG
TTCAGCGTAG AGCCGGAGAT CCCTGAGGGT GCTTTCACCA CCACCGCCAC CCTGCGCGAG
TTCATCGACG CGCACAACGC CAGCCTGCCA GCGCTGCTGA GTGCTGACGA TATCAAAGCG
CTGCTGGAAG AGTACAACGC CACCCTGCCG TCGCAGATGC CGCTTGGAGC TTCGGTAGAT
GAAACCTATG CATCGTATGA GCAGCTTCCC GAAGAATTCC AGCGCATTGA AAACGGCACC
AAACATACAG CCACGGCGAT GAAAGCCTGC ATCAAAGAGT ACAACGCCAC CCTGCCCGCG
CCGGTTAAAA CCAGCGGCAG CCGTGACGCG CTGCTGGAGC AACTGGCAAT AATCAACCCT
GACCTGGTCG CTCAGGAAGC GCAAAAATCG TCGCCGTTGA AAGTCTCTGG CACGAAGGCC
GATCTGATTC AGGCCGTGAA ATCAGTCAAC CCGGCAGTGG TATTCGCCGA CGAATTGCTG
GATGCGTGGC GGGAGAACAC CGAAGGGAAA GTGCTGGTCA CCCGCCAACA GCTCAGCACC
GCGCTGAACA TTCAGAAAGC CCTGCTGGAG CACCCGACCG CCGGCAAATT GCTGACTCAC
CCAAGCCGCG CTGTCGAGGT TAGCTATTTT GGGATTGATG AGGAAACCGG GTTGGAAGTT
CGGGTACGCC CTGACCTTGA GCTCGATATG GGCGGCCTGC GCATTGGCGC CGACCTGAAA
ACTATCAGCA TGTGGAACAT CAAGCAGGAA GGCCTGCGTG CGAAGTTGCA CCGGGAAATC
ATCGATCGGG ACTATCACCT GAGCGCGGCC ATGTACTGCG AAACTGCGGC GCTGGACCAG
TTTTTCTGGA TTTTCGTCAA CAAAGACGAG AACTACCACT GGGTCGCCAT CATTGAGGCG
TCTACCGAGT TGCTGGAACT TGGCATGCTG GAATACCGCA AAACAATGCG AGAGATAGCA
AACGGCTTCG ACACTGGTGA ATGGTCAGCG CCTATCACAG AAGACTACAC CGACGAACTG
AACGATTTTG ATGTGCGCCG CCTTGAAGCG TTGCGCGTAC AGGCATAA
 
Protein sequence
MSGTNPVFLV RKAKKSSGQK DAVLWCSDDF EAANATLDYL LIKSGAKLKD YFKAVATNFP 
VVNELPPEGE LSLTFCDYYQ LAKDNMTWTQ IPGVTLPSSE AAAAARQHIV DGVDTETGEV
LEDHTENFGN ESNSPAQATA PAPELTVVAT MPLRHRVLAQ YIGEGEYLYH VDASQKKEIL
RLEMDTDNSY VQNLLLAAEN VEAFKKAIEH DIHKIVNAVK KIFPVDGKTP ELATVIQFLK
TWFETEHIDR GLLVKEWAKG NRVSAIQRTE SGANAGGGNK TDRNPDYEYT LDTLDVEIAM
ATLPMDFNIY ELPGSVYRRA KEIVKKKESP FKEWSAALRA TPGILDYSRA AIFALIRSAH
PEFYHYPGRL QGYINANLTE TDHENPTEEA LTAARHTPEK DAVEEANRQL AAARGEYVEG
ISDPNDPKWV KTGTSQPTTE PELVKNVGNG IFDVSALMQN SSTHGTETNP ETTSNVQVQK
ADSDEKQAGD AVQAGEGDLG TGKEAVTVEN QNQAETHQNN DSVSQSEPEA QQNVPESQQE
EPEAAWPEYF EPGRYEGVPN EVYHAANGIS STQVKDARVS LMYFNARHVE KTIVKERSPV
LDMGNLVHVL ALQPENLEAE FSVEPEIPEG AFTTTATLRE FIDAHNASLP ALLSADDIKA
LLEEYNATLP SQMPLGASVD ETYASYEQLP EEFQRIENGT KHTATAMKAC IKEYNATLPA
PVKTSGSRDA LLEQLAIINP DLVAQEAQKS SPLKVSGTKA DLIQAVKSVN PAVVFADELL
DAWRENTEGK VLVTRQQLST ALNIQKALLE HPTAGKLLTH PSRAVEVSYF GIDEETGLEV
RVRPDLELDM GGLRIGADLK TISMWNIKQE GLRAKLHREI IDRDYHLSAA MYCETAALDQ
FFWIFVNKDE NYHWVAIIEA STELLELGML EYRKTMREIA NGFDTGEWSA PITEDYTDEL
NDFDVRRLEA LRVQA