| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2804 |
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| Symbol | |
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| ID | 6482623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2747066 |
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| End bp | 2747809 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642738127 |
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| Product | gifsy-1 prophage VmtV |
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| Protein accession | YP_002041861 |
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| Protein GI | 194443259 |
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| COG category | [N] Cell motility |
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| COG ID | [COG5492] Bacterial surface proteins containing Ig-like domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.573055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACAC CAAACCCACT GGTAAAAACG AAAGGCGCCG GAACCACATT CTGGCTGTAT
ACCGGCAGCG GCGATGCGTT TAAAAATCCA CTGGCTGATG ATGACTGGCT GCGACTGGCA
GGTATTAAGG ATCTGCAGCC CGGAGAAATG AGTGCAGATG CGGAAGACGA TGACTATCTT
GATGATGAAA ATGCCGACTG GAAAAGCACT ACGCAGGGGC AGAAAAGCGT CGGTGACACC
ACGGCCACGC TGGCCTGGAA ACCCGGTGAG ACCGGACAGA AAAAACTGGT TGAGCTGTTT
GACACCGGCG AAGTTCGCGC CTTCCGTATC AGGTATCCTA ACGGGACGGT TGATGTGTTC
CGCGGCTGGC TGAGTTCACT GGGTAAAACC GTGACGTCCA AAGAGGTGAT GACACGCAGC
GTAAAAATCA CCGGCGTCGG GCGTCCTTCT CTTGCGGAGG AGGATACACC TGACGTAGTC
AGCGTATCCG GCGTGACCGT TGCGCCGGCC AGTGCCACGG TGGCTGCCGG AGCCACCACC
ACGCTGACAT TTACGGTAAA ACCTGATAAC GCGTCAGATA AAACGCTGCA GGTTGCGACC
GCCGATCCGC TGATCGCCAC CGTCACGCTG AAGGATAATG TGGCCACGGT TAAAGGCGTG
AAGGCGGGCA GCGTGAATAT TGTTGGTATC AGCAGTGACG GCAGTCTTGT CGCGGTGGCA
GCAGTGACAG TGACGGCGTC ATAA
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| Protein sequence | MGTPNPLVKT KGAGTTFWLY TGSGDAFKNP LADDDWLRLA GIKDLQPGEM SADAEDDDYL
DDENADWKST TQGQKSVGDT TATLAWKPGE TGQKKLVELF DTGEVRAFRI RYPNGTVDVF
RGWLSSLGKT VTSKEVMTRS VKITGVGRPS LAEEDTPDVV SVSGVTVAPA SATVAAGATT
TLTFTVKPDN ASDKTLQVAT ADPLIATVTL KDNVATVKGV KAGSVNIVGI SSDGSLVAVA
AVTVTAS
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