Gene SNSL254_A2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2788 
Symbol 
ID6484433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp2729050 
End bp2730519 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content33% 
IMG OID642738113 
Productleucine-rich repeat protein 
Protein accessionYP_002041847 
Protein GI194445136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG GATTCCAACC AGCCATATTG CAATATGCAT ATACAAGTAA CGAGGCGACA 
TCAAACCTTG AGTTATTAAA TAAATGGAGA ATAGAATCCC CAGATATTGA GAAGGAGGAG 
CGTAATAGTA TTTACGACAA AATAATAGAA GCAAATCATA CCGGGAGCTT ATCAATTACT 
GCTCATCATG TTACCTCTAT TCCGGTATTT CCTGATAATT TATCCGAATT GAATTTATCT 
TCATGCTATA CACTGGAGTC TATTCCAAAT CTTCCTGATG GGTTAAAAAG TTTAACTATA 
TCTGGAAATC AGACCATTAA AATTTCATAT TTCCCAGATA GCTTAGAGTC ACTATCTATA 
GATATGCAGG CATATGAAGA AAATTATACT TTCCCCGCAT TACCTTATGG ATTAAAGAGT 
TTTACTGCAT GCTATGGTAA ATTTTTGCCT CCCCTTCCTC CGCATCTATC TTCTTTGTCA 
TTGCAAAATT TCTCTGAAAT ATTATGTGCT GAGTTACCAT ATAAATTAGA TAAATTAGAT 
TTACAAAATT GCCCTTTCTT GCCATTAATG AAAATGTTAC CTGAGGAGTT AAAAGAACTA 
AGTATTGAAC TTATACGAAC AGTTCCCGGT ACTGTTATAG ATGATATTTT GCCTGATAAG 
CTAAAAAAAT TAAGTATCAA CTTTTGTGAT AATATTAAAC TTCCAGTTAA GCTTCCTGTT 
AATTTAAAGT CTATCAATTT ATCCTCAAGG ACCCCTATTG CATGGGAAAT ACCAACCTGC 
AATCTGCCTG CACATATAGA TATTAGTACC GATGGTTATG TTAAGCTTAA TCCTGAATTT 
CTTACCAGGA GTGATATTAC CTTTAGTAAC AAACCTGCAG GAGATGTGTT AAGTTTTCAG 
CCTGGAGATG TGGTTTATGG TTTATGTAAG GCAAGAGATC GAGTAAATAC TTTAGTTAAT 
TCGTTATATT ATTTTTCAAA AAAAGATATT ATTATTCAAA ATACATTAAC AGATGCGGTC 
TGGGACAGGA AGAATAGAGC CGTGTTTAAT AAAGATGAGA AGATAGCAGA AAGATTGAAT 
GATGTTCAGA GAGGGATTTT TTTTAGAGAA TTTTTATCTC AACATAAAAA ATACAATATT 
ACCGAAGATA AATATTCAGA CTTATCCAAT GAGGAGTGCT GGATAAAAAC AAGTAAAGCC 
GGTCTTGAAT TTCAAACACG ATTGAGGGAA CGGTCAGTTA TTTTTGTCAT TGACAATTTA 
GTTGATGCTA TAAGTGATAT CGCAAATAAA ACAGGAAAGC ATGGTAATTC TATTACAGCA 
CATGAGCTAA GATGGGTATA TCGGAATCGA CATGATGATC TGGTAAAACA AAATGTTAAA 
TTTTTTCTTA ATGGTGAGGC TATTTCACAC GAAGATGTTT TTTCATTAGT TGGTTGGGAT 
AAATATAAGC CTAAAAATAG AAATCGTTGA
 
Protein sequence
MKIGFQPAIL QYAYTSNEAT SNLELLNKWR IESPDIEKEE RNSIYDKIIE ANHTGSLSIT 
AHHVTSIPVF PDNLSELNLS SCYTLESIPN LPDGLKSLTI SGNQTIKISY FPDSLESLSI 
DMQAYEENYT FPALPYGLKS FTACYGKFLP PLPPHLSSLS LQNFSEILCA ELPYKLDKLD 
LQNCPFLPLM KMLPEELKEL SIELIRTVPG TVIDDILPDK LKKLSINFCD NIKLPVKLPV 
NLKSINLSSR TPIAWEIPTC NLPAHIDIST DGYVKLNPEF LTRSDITFSN KPAGDVLSFQ 
PGDVVYGLCK ARDRVNTLVN SLYYFSKKDI IIQNTLTDAV WDRKNRAVFN KDEKIAERLN 
DVQRGIFFRE FLSQHKKYNI TEDKYSDLSN EECWIKTSKA GLEFQTRLRE RSVIFVIDNL 
VDAISDIANK TGKHGNSITA HELRWVYRNR HDDLVKQNVK FFLNGEAISH EDVFSLVGWD 
KYKPKNRNR