Gene SNSL254_A2784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2784 
Symbolrnc 
ID6482653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2724877 
End bp2725614 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content52% 
IMG OID642738110 
Productribonuclease III 
Protein accessionYP_002041844 
Protein GI194443007 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATCAGG TCTGTTTCGT GTGCTGGATT GTTGACGCAT TCATTTATTG GTATCGCATG 
AACCCCATCG TAATTAATCG GCTTCAACGG AAGCTGGGCT ACACTTTTAA TCATCAGGAG
CTGTTGCAGC AGGCATTAAC TCACCGCAGC GCCAGCAGTA AACATAACGA ACGCCTGGAA
TTTTTAGGTG ATTCAATCCT GAGCTTCGTT ATCGCTAACG CGCTTTATCA CCGTTTTCCA
CGGGTGGATG AGGGAGATAT GAGCCGTATG CGCGCCACGT TGGTACGTGG TAATACGCTG
GCGGAATTAG CCCGTGAATT TGATTTAGGC GAGTGCCTGC GTTTAGGGCC GGGCGAATTA
AAAAGCGGCG GATTCCGTCG GGAGTCCATT CTGGCGGACA CCGTTGAAGC GTTAATCGGC
GGAGTATTTC TCGATAGTAA TATCCAGACC GTCGAGCAGT TAATCCTTAA CTGGTATAAA
ACCCGTCTGG ATGAGATAAG TCCGGGCGAT AAACAAAAAG ATCCGAAAAC GCGCTTGCAG
GAGTATTTGC AGGGTCGCCA TCTGCCGCTG CCATCTTACC TGGTTGTGCA GGTACGCGGC
GAGGCGCACG ATCAGGAATT TACTATCCAC TGCCAGGTCA GCGGCCTGAG CGAACCGGTG
GTTGGCACGG GTTCCAGCCG TCGTAAGGCG GAGCAGGCTG CCGCCGAACA GGCGCTGAAA
AAACTGGAGT TGGAATGA
 
Protein sequence
MYQVCFVCWI VDAFIYWYRM NPIVINRLQR KLGYTFNHQE LLQQALTHRS ASSKHNERLE 
FLGDSILSFV IANALYHRFP RVDEGDMSRM RATLVRGNTL AELAREFDLG ECLRLGPGEL
KSGGFRRESI LADTVEALIG GVFLDSNIQT VEQLILNWYK TRLDEISPGD KQKDPKTRLQ
EYLQGRHLPL PSYLVVQVRG EAHDQEFTIH CQVSGLSEPV VGTGSSRRKA EQAAAEQALK
KLELE