| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2770 |
|---|
| Symbol | |
|---|
| ID | 6486647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 2712447 |
|---|
| End bp | 2713991 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642738096 |
|---|
| Product | putative transglycosylase |
|---|
| Protein accession | YP_002041830 |
|---|
| Protein GI | 194446086 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 83 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAAT TAAAGATTAA TTATCTGTTC ATCGGCATAT TGACGCTGCT GCTGGCAGCA
GCCCTTTGGC CCTCAATCCC CTGGTTCGGT AAAACCGAAA ACCATATCGC CGCGATTCAA
GCCCGGGGGG TACTGCGCGT CAGTACGATC GACTCGCCAT TAACCTATTC CGTTATCAAC
GGTAAAAAAT ATGGTCTGGA CTATGAACTG GCGCAGCAGT TCGCCAACTA TCTCGGCGTG
AAGCTGAAAG TGACGGTGCG CCAGAATATC AGCCAGTTGT TTGACGATCT CGATAACGGC
AATGCCGACC TGCTCGCGGC AGGGCTGGTC TACGACAGCG CGCGCGTTAA AAACTATCAG
CCTGGTCCCA TGTATTATTC GGTTTCGCAA CAGCTCGTCT ACCGGGTCGG ACAATATCGC
CCACGTTCGC TGGCGACCGT TAACGAGAAT CAGCTTACCA TTGCGCCAGG GCACGTCGTG
GTCAATGACT TACAGCGTTT AAAAGAGACA AAGTTTCCCG ACCTGAGCTG GAAAGTGGAT
GATAAAAAAG GCTCGACGAC GCTGCTGGAA GAGGTCATCA GCGGCAAACT GGATTACACC
ATTGCCGATT CAGTGGCGAT CAGTCTGTTT CAGCGCGTTC ATCCCGAGCT GGCCGTGGCG
CTGGATGTCA CGGATGAACA GCCCGTGACC TGGTTTAGCC GACTGGACGA CGATAATACG
CTCTCCGCCG CGCTGCTCGA TTTTTTCAAT TCGATCAATG AAGACGGGTC GTTGGCGCGG
ATCGAAGAGA AATATCTGGG ACATGGCGAT GATTTCGACT ACGTTGATAC CCGCTCTTTC
CTGCGAGCGG TAGATAACGT CCTGCCGGAG CTGGAACCGT TATTTAAAAA ATATGCCAAA
GAGATAGACT GGCGCCTGCT GGCGGCGATT TCTTATCAAG AATCACACTG GGACCCGCTG
GCGACCTCGC CAACCGGCGT GCGCGGCCTG ATGATGCTGA CTAAAAATAC CGCCCAAAGT
CTGGGGCTGA CCGACCGTAC CGATGCGGAG CAAAGCATCA GCGGCGGCGC TCGCTATCTT
GAAGATATGA TGGCTAAAGT TCCCGAAACC GTTCCGGAAG ACGAGCGTAT CTGGTTTGCC
TTAGCCGCCT ACAATATGGG TTATGCGCAC ATGCTCGATG CCAGATCGCT GACGGTAAAA
ACCAAAGGCA ATCCGGATAG CTGGACCGAT GTGAAGCAGC GTTTGCCTCT GTTAAGCCAA
AAACCGTATT ACAGTAAGCT AACCTACGGT TACGCGCGTG GACATGAGGC TTATGCTTAT
GTGGAAAATA TCCGTAAATA CCAGATAAGT TTGGTGGGGT ATTTGCAGGA AAAAGAAAAG
CAGGAAGCGG AAGCTATGAA ACTGGCGCAG GATTACCCGG CGGTGTCGCC GGAGGAGCTG
AATAAAGCCC CCTTCCCCTT CCTGTCGTTT TTATCGCAGT CATCAGGCTA CCTGACGCAT
TCGCCGTCTT TACTGTTTAC GCCGCAGAAG AAAGAAGAAA AATAG
|
|---|
| Protein sequence | MKKLKINYLF IGILTLLLAA ALWPSIPWFG KTENHIAAIQ ARGVLRVSTI DSPLTYSVIN
GKKYGLDYEL AQQFANYLGV KLKVTVRQNI SQLFDDLDNG NADLLAAGLV YDSARVKNYQ
PGPMYYSVSQ QLVYRVGQYR PRSLATVNEN QLTIAPGHVV VNDLQRLKET KFPDLSWKVD
DKKGSTTLLE EVISGKLDYT IADSVAISLF QRVHPELAVA LDVTDEQPVT WFSRLDDDNT
LSAALLDFFN SINEDGSLAR IEEKYLGHGD DFDYVDTRSF LRAVDNVLPE LEPLFKKYAK
EIDWRLLAAI SYQESHWDPL ATSPTGVRGL MMLTKNTAQS LGLTDRTDAE QSISGGARYL
EDMMAKVPET VPEDERIWFA LAAYNMGYAH MLDARSLTVK TKGNPDSWTD VKQRLPLLSQ
KPYYSKLTYG YARGHEAYAY VENIRKYQIS LVGYLQEKEK QEAEAMKLAQ DYPAVSPEEL
NKAPFPFLSF LSQSSGYLTH SPSLLFTPQK KEEK
|
|---|
| |