Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2761 |
Symbol | |
ID | 6484966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2702200 |
End bp | 2703660 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642738089 |
Product | inner membrane transporter YbgH |
Protein accession | YP_002041823 |
Protein GI | 194446808 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAC CCTCACAACC GCGCGCGATT TTTTACATCG TGGCGATTCA AATTTGGGAA TACTTCAGCT TTTACGGCAT GCGTGCCTTA CTCATCCTTT ATCTTACCCA CCAGCTTGGT TTTAATGACA GCCACGCGAT CAACCTCTTC AGCGCCTACG CCTCTTTAGT TTACGTTACC CCTATTCTTG GCGGCTGGCT TGCCGACCGC CTGCTTGGCA ACCGCGTGGC GGTTATCACC GGCGCCTTAT TGATGACGCT GGGTCATGTG GTATTGGGCT TAGAATCTGA TTCAACGCTG AGTTTATATG CGGCGCTCGC CATTATTATC TGCGGCTACG GCTTGTTTAA ATCCAATATT AGCTGTCTGC TGGGCGAACT TTACGCCCCT GATGACAACC GCCGCGACGG GGGATTCTCG CTGCTCTACG CCGCCGGGAA TATTGGATCG ATAGCCGCGC CGATCGCCTG TGGTCTGGCG GCGCAGTGGT ATGGCTGGCA TGTCGGCTTT GCGCTGGCGG GCGTGGGAAT GTTCATCGGC CTGCTCATCT TTTTAAGCGG TCATCGCCAC TTTCAGCAGA CGCGCGGTGT TAATCGCCCC GCGCTGCGGG CGGTTAAATT CGCCCTTCCA ACCTGGGGTT GGCTGGTATT AATGCTGTGT ATCGCACCGG TATTCTTCAC CCTCCTGCTG GAAAATAACT GGTCTGGCTA TGTGCTGGCC ATTGTCTGCG TCTTCGCGGC GCAACTTATC GCCCGTATTA TGGTTAAATT TCCCGAACAC CGTCGCGCCT TGTGGCAAAT CGTTCTGTTA ATGATCACCG GCACTCTCTT CTGGGTTCTG GCGCAGCAGG GCGGAAGTTC GATCAGTTTA TTCATCGACC GTTTTGTCAA CCGCCACTGG CTAAACATGA CCGTCCCCAC CGCATTGTTC CAGTCGGTCA ATGCGATTGC GGTGATGGCG GCGGGCGTGG TGCTGGCGTG GCTGAGCAGC CCGAAAGAGA GCGCCCGCTC GGTGCTGCGC GTCTGGCTTA AATTTGCCGT GGGGCTGGTA TTGATGGGCG GCGGTTTTAT GCTGCTGGCG CTAAACGCGC ATCAGGCCCG GTTAGACGGG CAGGCATCAA TGGGAATGAT GATCGCAGGG CTGGCGCTGA TGGGCTTTGC GGAACTGTTT ATTGATCCGG TCGCGATGGC GCAAATTACC CGCCTCAACC TGCCTGGCGT CACGGGCGTA CTGACCGGTA TTTATATGCT GGCGACCGGC GCGGTCGCTA ACTGGCTGGC TGGCGTGGTC GCGCAACAAA CCACGGAATC GCAAATTAGT GATACGGCGG TAGCCGCCTA CGGACACTTT TTCTCGCAAA TGGGCGAGTG GACGCTAAGT TGCGTGGCGC TGATCGTCGC CATTGTCGGC CTGAGATGGG TTTGCACCCG GACTACATCG GCGCTACCGC AGGGCGATTA A
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Protein sequence | MKTPSQPRAI FYIVAIQIWE YFSFYGMRAL LILYLTHQLG FNDSHAINLF SAYASLVYVT PILGGWLADR LLGNRVAVIT GALLMTLGHV VLGLESDSTL SLYAALAIII CGYGLFKSNI SCLLGELYAP DDNRRDGGFS LLYAAGNIGS IAAPIACGLA AQWYGWHVGF ALAGVGMFIG LLIFLSGHRH FQQTRGVNRP ALRAVKFALP TWGWLVLMLC IAPVFFTLLL ENNWSGYVLA IVCVFAAQLI ARIMVKFPEH RRALWQIVLL MITGTLFWVL AQQGGSSISL FIDRFVNRHW LNMTVPTALF QSVNAIAVMA AGVVLAWLSS PKESARSVLR VWLKFAVGLV LMGGGFMLLA LNAHQARLDG QASMGMMIAG LALMGFAELF IDPVAMAQIT RLNLPGVTGV LTGIYMLATG AVANWLAGVV AQQTTESQIS DTAVAAYGHF FSQMGEWTLS CVALIVAIVG LRWVCTRTTS ALPQGD
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