Gene SNSL254_A2761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2761 
Symbol 
ID6484966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2702200 
End bp2703660 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content56% 
IMG OID642738089 
Productinner membrane transporter YbgH 
Protein accessionYP_002041823 
Protein GI194446808 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3104] Dipeptide/tripeptide permease 
TIGRFAM ID[TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC CCTCACAACC GCGCGCGATT TTTTACATCG TGGCGATTCA AATTTGGGAA 
TACTTCAGCT TTTACGGCAT GCGTGCCTTA CTCATCCTTT ATCTTACCCA CCAGCTTGGT
TTTAATGACA GCCACGCGAT CAACCTCTTC AGCGCCTACG CCTCTTTAGT TTACGTTACC
CCTATTCTTG GCGGCTGGCT TGCCGACCGC CTGCTTGGCA ACCGCGTGGC GGTTATCACC
GGCGCCTTAT TGATGACGCT GGGTCATGTG GTATTGGGCT TAGAATCTGA TTCAACGCTG
AGTTTATATG CGGCGCTCGC CATTATTATC TGCGGCTACG GCTTGTTTAA ATCCAATATT
AGCTGTCTGC TGGGCGAACT TTACGCCCCT GATGACAACC GCCGCGACGG GGGATTCTCG
CTGCTCTACG CCGCCGGGAA TATTGGATCG ATAGCCGCGC CGATCGCCTG TGGTCTGGCG
GCGCAGTGGT ATGGCTGGCA TGTCGGCTTT GCGCTGGCGG GCGTGGGAAT GTTCATCGGC
CTGCTCATCT TTTTAAGCGG TCATCGCCAC TTTCAGCAGA CGCGCGGTGT TAATCGCCCC
GCGCTGCGGG CGGTTAAATT CGCCCTTCCA ACCTGGGGTT GGCTGGTATT AATGCTGTGT
ATCGCACCGG TATTCTTCAC CCTCCTGCTG GAAAATAACT GGTCTGGCTA TGTGCTGGCC
ATTGTCTGCG TCTTCGCGGC GCAACTTATC GCCCGTATTA TGGTTAAATT TCCCGAACAC
CGTCGCGCCT TGTGGCAAAT CGTTCTGTTA ATGATCACCG GCACTCTCTT CTGGGTTCTG
GCGCAGCAGG GCGGAAGTTC GATCAGTTTA TTCATCGACC GTTTTGTCAA CCGCCACTGG
CTAAACATGA CCGTCCCCAC CGCATTGTTC CAGTCGGTCA ATGCGATTGC GGTGATGGCG
GCGGGCGTGG TGCTGGCGTG GCTGAGCAGC CCGAAAGAGA GCGCCCGCTC GGTGCTGCGC
GTCTGGCTTA AATTTGCCGT GGGGCTGGTA TTGATGGGCG GCGGTTTTAT GCTGCTGGCG
CTAAACGCGC ATCAGGCCCG GTTAGACGGG CAGGCATCAA TGGGAATGAT GATCGCAGGG
CTGGCGCTGA TGGGCTTTGC GGAACTGTTT ATTGATCCGG TCGCGATGGC GCAAATTACC
CGCCTCAACC TGCCTGGCGT CACGGGCGTA CTGACCGGTA TTTATATGCT GGCGACCGGC
GCGGTCGCTA ACTGGCTGGC TGGCGTGGTC GCGCAACAAA CCACGGAATC GCAAATTAGT
GATACGGCGG TAGCCGCCTA CGGACACTTT TTCTCGCAAA TGGGCGAGTG GACGCTAAGT
TGCGTGGCGC TGATCGTCGC CATTGTCGGC CTGAGATGGG TTTGCACCCG GACTACATCG
GCGCTACCGC AGGGCGATTA A
 
Protein sequence
MKTPSQPRAI FYIVAIQIWE YFSFYGMRAL LILYLTHQLG FNDSHAINLF SAYASLVYVT 
PILGGWLADR LLGNRVAVIT GALLMTLGHV VLGLESDSTL SLYAALAIII CGYGLFKSNI
SCLLGELYAP DDNRRDGGFS LLYAAGNIGS IAAPIACGLA AQWYGWHVGF ALAGVGMFIG
LLIFLSGHRH FQQTRGVNRP ALRAVKFALP TWGWLVLMLC IAPVFFTLLL ENNWSGYVLA
IVCVFAAQLI ARIMVKFPEH RRALWQIVLL MITGTLFWVL AQQGGSSISL FIDRFVNRHW
LNMTVPTALF QSVNAIAVMA AGVVLAWLSS PKESARSVLR VWLKFAVGLV LMGGGFMLLA
LNAHQARLDG QASMGMMIAG LALMGFAELF IDPVAMAQIT RLNLPGVTGV LTGIYMLATG
AVANWLAGVV AQQTTESQIS DTAVAAYGHF FSQMGEWTLS CVALIVAIVG LRWVCTRTTS
ALPQGD