Gene SNSL254_A2747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2747 
Symbol 
ID6485140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2685433 
End bp2686311 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content52% 
IMG OID642738075 
Producthypothetical protein 
Protein accessionYP_002041809 
Protein GI194443844 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.282698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones94 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTC AACATACCCG ACGCATCGTC AAATCCCTTT TTATTCTGTT TATCATTGTG 
GTCTGTATTT ATCTGCTACC CCGCGTAGCG ATCAATGCCT TTTATTACCC GGACAATAAA
GTCTATGGGC CAACCCCTGC CGAAGCTGAA TCCATTACCT TTACCGCCAA AGATGGCACG
CATCTGCACG GCTGGTTTAT TCCCACTGCT TTCGGCAGGC CGGAAAACGC CGTCGCGACG
GTGATTCATG CCCATGGCAA CGCCGGAAAT ATGTCGGCGC ACTGGCCGTT AGTCAGTTGG
CTGCCAGAAC GCAACGTAAA CCTGTTTATG TTTGATTACC GTGGGTTTGG CGAATCTGAG
GGCACCCCAT CACAAGAAGG GCTACTGGAC GATACGAAAA GCGCGATAGA TTATGTGCGG
CATCGTGCCG ACGTTAACCC CGAGCGCCTG GTACTGCTGG GGCAGAGCCT GGGCGGCAAT
AATGTGCTGG CCGCCGTAGG CCACTGCGTA GGCTGCGCAA ATATGCGCTA CGCCGACCAG
GCGGGCATAC GTGCGATTAT TCTCGACTCA ACGTTTTTAT CCTATTCCTC CATCGCCAAC
CAGATGATCC CGGGCAGCGG CTATTTGCTT GATGACCGCT ATAGCGCGGA TCGCAATATC
GCCAGCGTCA GCCCCATTCC GGTATTGATT CTTCATGGCA CGGCAGACCA TGTTATTCCC
TGGCAGGACA GTGAGAAATT GTATGCCCTC GCCCGGGAGC CCAAACAAAA AATCTTCATT
CCTGACGGCG ATCACATTGA TGCTTTTTCC GGACGTTATG CAAACCTTTA CCGTGATGCA
ATGATTAAAT TTATTCAGAC CGCGCTATCC GCTAAATAG
 
Protein sequence
MTLQHTRRIV KSLFILFIIV VCIYLLPRVA INAFYYPDNK VYGPTPAEAE SITFTAKDGT 
HLHGWFIPTA FGRPENAVAT VIHAHGNAGN MSAHWPLVSW LPERNVNLFM FDYRGFGESE
GTPSQEGLLD DTKSAIDYVR HRADVNPERL VLLGQSLGGN NVLAAVGHCV GCANMRYADQ
AGIRAIILDS TFLSYSSIAN QMIPGSGYLL DDRYSADRNI ASVSPIPVLI LHGTADHVIP
WQDSEKLYAL AREPKQKIFI PDGDHIDAFS GRYANLYRDA MIKFIQTALS AK