Gene SNSL254_A2738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2738 
SymbolhscA 
ID6483517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2678246 
End bp2680096 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content59% 
IMG OID642738066 
Productchaperone protein HscA 
Protein accessionYP_002041800 
Protein GI194442425 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR01991] Fe-S protein assembly chaperone HscA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTAT TACAAATTAG TGAGCCTGGT CTGAGCGCCG CGCCGCATCA GCGTCGTCTG 
GCGGCGGGCA TCGACTTAGG CACTACCAAC TCTCTGGTTG CGACGGTTCG CAGCGGCCAG
GCGGAAACTC TGCCTGACCA CGAAGGGCGC CACCTGTTGC CTTCAGTGGT TCACTATCAG
CAGCAGGGCC ATACGGTCGG TTACGCTGCG CGTGACAATG CCGCGCAGGA TACGGCCAAC
ACTATCAGCT CTGTGAAACG CATGATGGGA CGCTCGCTGG CGGATATCCA GGCGCGCTAT
CCGCATCTGC CTTACCGGTT TAAGGCAAGC GTTAATGGGC TGCCGATGAT TGACACGGCG
GCTGGATTGC TCAATCCGGT ACGCGTATCG GCTGATATTC TCAAAGCGCT GGCCGCGCGG
GCTAGCGAAT CGCTCTCCGG CGAGCTGGAT GGCGTGGTGA TTACCGTTCC CGCCTATTTC
GATGATGCCC AACGTCAGGG GACGAAAGAC GCCGCGCGGC TGGCAGGCCT GCATGTGCTG
CGCCTGCTCA ACGAACCGAC GGCGGCGGCG ATTGCCTACG GTCTGGACTC AGGCAAAGAA
GGCGTTATTG CTGTTTACGA TCTCGGCGGC GGTACCTTCG ATATCTCTAT TTTACGCCTG
AGCCGCGGGG TGTTTGAAGT GCTGGCGACG GGCGGTGATT CTGCGCTCGG CGGCGACGAC
TTTGACCATC TGCTGGCGGA CTATATTCGC GAGCAGGCGG GAATTGCCGA TCGTAGCGAC
AATCGCGTTC AGCGCGAACT GCTGGATGCC GCGATTACCG CGAAAATCGC CTTAAGCGAT
GCCGATACCG TTCGCGTTAA TGTTGCGGGC TGGCAGGGGG AGATCACTCG CGAGCAGTTT
AACGATCTCA TTTCCGCGCT GGTTAAGCGC ACGCTATTGG CCTGCCGCCG CGCATTGAAA
GATGCCGGCG TTGAGCCCCA GGACGTTCTG GAAGTGGTCA TGGTCGGCGG TTCGACCCGT
GTACCGCTGG TGCGTGAGCG GGTGGGCGAA TTTTTTGGCC GCACGCCGTT AACCGCTATT
GACCCGGATA AAGTGGTCGC TATTGGCGCA GCGATTCAGG CCGATATTCT GGTCGGCAAC
AAGCCGGACA GCGAAATGCT GCTGCTGGAC GTGATTCCAC TCTCTCTTGG GCTGGAAACG
ATGGGCGGCC TGGTGGAAAA AGTCATTCCG CGCAACACCA CTATCCCGGT GGCGCGCGCG
CAGGATTTCA CCACCTTCAA AGACGGCCAG ACCGCGATGT CTATCCATGT GATGCAGGGC
GAACGCGAAC TGGTGCAGGA CTGCCGCTCG CTGGCGCGCT TTGCGCTGCG CGGGATTCCG
CCGCTGCCGG CGGGCGGGGC GCATATTCGC GTGACCTTCC AGGTAGACGC CGATGGCCTG
TTGAGCGTCA CCGCAATGGA AAAATCCACC GGCGTCGAGG CCTCCATTCA GGTCAAACCT
TCCTATGGCC TGACCGATGG CGAAATCGCC TCGATGATCA AGGATTCCAT GAGTTTTGCC
GAGCAGGACG TGAAAGCGCG TATGCTGGCG GAGCAAAAAG TCGAAGCCGC GCGCGTGCTG
GAAAGTTTGA CCGGCGCGCT AACTGCCGAC GCCGCGCTGT TAAGCGCCGC AGAACGTCAA
TGCATTGATG ATGCCGCCGC ACATTTAAGC GCGGTCGCAC AAGGCGATGA TGTTGACGCC
ATAGAACAAG CCATTAAAAA CGTAGATAAA CAAACCCAGG AATTTGCCGC TCGCCGCATG
GACCAGTCGG TTCGTCGCGC GTTGAAAGGC CATTCCGTAG ACGAGGTTTA A
 
Protein sequence
MALLQISEPG LSAAPHQRRL AAGIDLGTTN SLVATVRSGQ AETLPDHEGR HLLPSVVHYQ 
QQGHTVGYAA RDNAAQDTAN TISSVKRMMG RSLADIQARY PHLPYRFKAS VNGLPMIDTA
AGLLNPVRVS ADILKALAAR ASESLSGELD GVVITVPAYF DDAQRQGTKD AARLAGLHVL
RLLNEPTAAA IAYGLDSGKE GVIAVYDLGG GTFDISILRL SRGVFEVLAT GGDSALGGDD
FDHLLADYIR EQAGIADRSD NRVQRELLDA AITAKIALSD ADTVRVNVAG WQGEITREQF
NDLISALVKR TLLACRRALK DAGVEPQDVL EVVMVGGSTR VPLVRERVGE FFGRTPLTAI
DPDKVVAIGA AIQADILVGN KPDSEMLLLD VIPLSLGLET MGGLVEKVIP RNTTIPVARA
QDFTTFKDGQ TAMSIHVMQG ERELVQDCRS LARFALRGIP PLPAGGAHIR VTFQVDADGL
LSVTAMEKST GVEASIQVKP SYGLTDGEIA SMIKDSMSFA EQDVKARMLA EQKVEAARVL
ESLTGALTAD AALLSAAERQ CIDDAAAHLS AVAQGDDVDA IEQAIKNVDK QTQEFAARRM
DQSVRRALKG HSVDEV