Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2738 |
Symbol | hscA |
ID | 6483517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2678246 |
End bp | 2680096 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642738066 |
Product | chaperone protein HscA |
Protein accession | YP_002041800 |
Protein GI | 194442425 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR01991] Fe-S protein assembly chaperone HscA |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 97 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTAT TACAAATTAG TGAGCCTGGT CTGAGCGCCG CGCCGCATCA GCGTCGTCTG GCGGCGGGCA TCGACTTAGG CACTACCAAC TCTCTGGTTG CGACGGTTCG CAGCGGCCAG GCGGAAACTC TGCCTGACCA CGAAGGGCGC CACCTGTTGC CTTCAGTGGT TCACTATCAG CAGCAGGGCC ATACGGTCGG TTACGCTGCG CGTGACAATG CCGCGCAGGA TACGGCCAAC ACTATCAGCT CTGTGAAACG CATGATGGGA CGCTCGCTGG CGGATATCCA GGCGCGCTAT CCGCATCTGC CTTACCGGTT TAAGGCAAGC GTTAATGGGC TGCCGATGAT TGACACGGCG GCTGGATTGC TCAATCCGGT ACGCGTATCG GCTGATATTC TCAAAGCGCT GGCCGCGCGG GCTAGCGAAT CGCTCTCCGG CGAGCTGGAT GGCGTGGTGA TTACCGTTCC CGCCTATTTC GATGATGCCC AACGTCAGGG GACGAAAGAC GCCGCGCGGC TGGCAGGCCT GCATGTGCTG CGCCTGCTCA ACGAACCGAC GGCGGCGGCG ATTGCCTACG GTCTGGACTC AGGCAAAGAA GGCGTTATTG CTGTTTACGA TCTCGGCGGC GGTACCTTCG ATATCTCTAT TTTACGCCTG AGCCGCGGGG TGTTTGAAGT GCTGGCGACG GGCGGTGATT CTGCGCTCGG CGGCGACGAC TTTGACCATC TGCTGGCGGA CTATATTCGC GAGCAGGCGG GAATTGCCGA TCGTAGCGAC AATCGCGTTC AGCGCGAACT GCTGGATGCC GCGATTACCG CGAAAATCGC CTTAAGCGAT GCCGATACCG TTCGCGTTAA TGTTGCGGGC TGGCAGGGGG AGATCACTCG CGAGCAGTTT AACGATCTCA TTTCCGCGCT GGTTAAGCGC ACGCTATTGG CCTGCCGCCG CGCATTGAAA GATGCCGGCG TTGAGCCCCA GGACGTTCTG GAAGTGGTCA TGGTCGGCGG TTCGACCCGT GTACCGCTGG TGCGTGAGCG GGTGGGCGAA TTTTTTGGCC GCACGCCGTT AACCGCTATT GACCCGGATA AAGTGGTCGC TATTGGCGCA GCGATTCAGG CCGATATTCT GGTCGGCAAC AAGCCGGACA GCGAAATGCT GCTGCTGGAC GTGATTCCAC TCTCTCTTGG GCTGGAAACG ATGGGCGGCC TGGTGGAAAA AGTCATTCCG CGCAACACCA CTATCCCGGT GGCGCGCGCG CAGGATTTCA CCACCTTCAA AGACGGCCAG ACCGCGATGT CTATCCATGT GATGCAGGGC GAACGCGAAC TGGTGCAGGA CTGCCGCTCG CTGGCGCGCT TTGCGCTGCG CGGGATTCCG CCGCTGCCGG CGGGCGGGGC GCATATTCGC GTGACCTTCC AGGTAGACGC CGATGGCCTG TTGAGCGTCA CCGCAATGGA AAAATCCACC GGCGTCGAGG CCTCCATTCA GGTCAAACCT TCCTATGGCC TGACCGATGG CGAAATCGCC TCGATGATCA AGGATTCCAT GAGTTTTGCC GAGCAGGACG TGAAAGCGCG TATGCTGGCG GAGCAAAAAG TCGAAGCCGC GCGCGTGCTG GAAAGTTTGA CCGGCGCGCT AACTGCCGAC GCCGCGCTGT TAAGCGCCGC AGAACGTCAA TGCATTGATG ATGCCGCCGC ACATTTAAGC GCGGTCGCAC AAGGCGATGA TGTTGACGCC ATAGAACAAG CCATTAAAAA CGTAGATAAA CAAACCCAGG AATTTGCCGC TCGCCGCATG GACCAGTCGG TTCGTCGCGC GTTGAAAGGC CATTCCGTAG ACGAGGTTTA A
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Protein sequence | MALLQISEPG LSAAPHQRRL AAGIDLGTTN SLVATVRSGQ AETLPDHEGR HLLPSVVHYQ QQGHTVGYAA RDNAAQDTAN TISSVKRMMG RSLADIQARY PHLPYRFKAS VNGLPMIDTA AGLLNPVRVS ADILKALAAR ASESLSGELD GVVITVPAYF DDAQRQGTKD AARLAGLHVL RLLNEPTAAA IAYGLDSGKE GVIAVYDLGG GTFDISILRL SRGVFEVLAT GGDSALGGDD FDHLLADYIR EQAGIADRSD NRVQRELLDA AITAKIALSD ADTVRVNVAG WQGEITREQF NDLISALVKR TLLACRRALK DAGVEPQDVL EVVMVGGSTR VPLVRERVGE FFGRTPLTAI DPDKVVAIGA AIQADILVGN KPDSEMLLLD VIPLSLGLET MGGLVEKVIP RNTTIPVARA QDFTTFKDGQ TAMSIHVMQG ERELVQDCRS LARFALRGIP PLPAGGAHIR VTFQVDADGL LSVTAMEKST GVEASIQVKP SYGLTDGEIA SMIKDSMSFA EQDVKARMLA EQKVEAARVL ESLTGALTAD AALLSAAERQ CIDDAAAHLS AVAQGDDVDA IEQAIKNVDK QTQEFAARRM DQSVRRALKG HSVDEV
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