| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2727 |
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| Symbol | |
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| ID | 6483065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2667812 |
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| End bp | 2672746 |
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| Gene Length | 4935 bp |
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| Protein Length | 1644 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642738056 |
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| Product | hypothetical protein |
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| Protein accession | YP_002041790 |
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| Protein GI | 194444792 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATT TACGCGTGGT GGCCTGCATG ATCATGCTGG CGCTGGCGGG ATGCGATAAC
AACGATAAAA CCGCCCCGAC GACTAAAAGC GAAGCGCCAG CCGTAGCGCA GCCCTCGCCC
GCGCAAGACC CGGCACAGCT ACAAAAGCTG GCGCAGCAAA GCCAGGGCAA AGCGCTCACG
CTATTAGACG CCTCCGAAGC GCAGCTTGAC GGCGCGGCGA CGCTGGTGCT GACGTTTTCA
GTTCCTTTAG ATCCTGAACA GGATTTCTCC CGTGTGGTTC ACGTGGTTGA TAAGAAAAGC
GGCAGCGTTG ACGGCGCATG GGAGCTGGCG CCAAATTTAA AAGAGCTAAG GTTACGTCAT
CTGGAACCTG AACGCGTGCT GGTGGTCACG GTTGATCCTG CCGTTAAAGC GCTGAATAAC
GCCACCTTCG GCAAGTCTTA TGAAAAAACG ATTACCACGC GTGATGTCCA GCCCAGCGTC
GGCTTTGCCA GCCGGGGATC GCTGCTACCG GGGAAAATCG CGGAAGGACT GCCGGTCATG
GCGCTTAACG TCAACCATGT TGATGTAAAC TTTTTCCGCG TTAAGCCCGG ATCGCTGGCG
TCATTTGTCA GCCAGTGGGA GTACCGTAGT TCTCTCTCTA ACTGGGAGTC CGACAATCTG
CTGAAAATGG CGGATCTGGT TTATACCGGT CGTTTTGATC TTAATCCGGC GCGCAATACG
CGTGAGAAAC TGCTGCTGCC ATTAAGCGAT ATTAAGCCGC TGCAACAGGC GGGCGTATAT
GTGGCGGTAA TGAATCAGGC TGGACACTAC AACTATAGTA ATGCCGCTAC GTTGTTTACC
CTTAGCGATA TCGGCGTGTC CGCGCACCGT TACCATAATC GGCTGGATAT CTTTACGCAA
AGCCTGGAAA ACGGCGCGGC GCAGTCGGGA ATTGAGATCG TTCTTCTGAA TGATAAAGGG
CAGACGCTGG CGCAGGCGAC GAGCGACGCG CAGGGGCATG TGCAACTGGA GGCTGATAAA
GCGGCGGCGC TATTACTGGC GCGTAAAGAG GGGCAGACCA CGCTGCTCGA TCTCACGCTT
CCGGCTCTGG ATCTGTCGGA ATTTAATGTC GCTGGCGCGC CCGGCTACAG CAAGCAGTTC
TTTATGTTCG GCCCGCGCGA TCTCTACCGA CCGGGCGAAA CGGTTATCCT CAACGGATTA
CTGCGCGATA GCGACGGTAA AACGCTGCCC GATCAACCCG TTAAGCTGGA AGTGGTAAAA
CCAGACGGAC AGGTGATGCG TACCGTCGTC AGCCAGCCGG AAAACGGGCT ATACCGTTTG
AATTATCCGC TGGATATCAA CGCGCCGACC GGCTTGTGGC ATGTCCGCGC CAACACCGGC
GATAATTTGC TGCGGAGTTG GGATTTCCAC GTGGAAGACT TTATGCCGGA GCGGATGGCG
CTCAACCTGA CGGCGCAAAA AACACCTCTG GCGCCTGCGG ATGAGGTGAA ATTCTCCGTT
GTCGGCTATT ACTTGTATGG CGCGCCTGCT AACGGCAATA CCCTGCAAGG GCAACTTTTC
CTGCGTCCGC TGCGCGACGC TGTCGCGGCG TTGCCTGGCT TCCAGTTCGG CAATATTGCT
GAAGAGAATC TTTCGCGCAG CCTGGACGAA GTTCAACTGA CGTTGGATAA AGGCGGACGT
GGTGAAGTGA GTGCTGCCAG CCAGTGGCAA GAAGCGCATT CGCCGCTGCA GGTAATTCTA
CAGGCCAGCC TGCTGGAGTC TGGCGGTCGT CCGGTCACTC GTCGCGTAGA GCAGGCGATT
TGGCCTGCCG ATACGTTACC GGGAATTCGT CCACAGTTCG CCGCCAAAGC GGTATACGAC
TACCGTACGG ATACCACCGT TAATCAACCG ATTGTCGACG AAGACAGCAA CGCCGCATTC
GATATTGTTT ACGCCAACGC GCAGGGCGAG AAAAAAGCGG TGTCCGGTTT ACAGGTGCGG
CTCATCCGCG AGCGTCGCGA CTATTACTGG AACTGGTCGG AAAGTGAAGG CTGGCAGTCG
CAGTTTGATC AAAAAGATCT GGTGGAGGGC GAGCAGACGC TGGATCTGAA CGCGGATGAA
ACCGGAAAAG TCAGCTTCCC GGTGGAATGG GGCGCGTACC GTCTGGAGGT CAAAGCGCCG
AATGAGACGG TCAGCAGCGT TCGTTTCTGG GCCGGCTATA GCTGGCAGGA TAACAGCGAC
GGTAGCGGCG CGGCGCGTCC GGATCGCGTC ACCCTCAAAC TGGATAAAGC GAATTATCGT
CCAGGCGACA CCATGAAATT GCATATCGCC GCGCCGGTCG CCGGTAAAGG TTATGCCATG
GTGGAGTCCA GCGATGGTCC GCTGTGGTGG CAGGCGATCG ACGTGCCGGA GCAGGGGCTG
GAGCTCACGA TTCCGGTGGA TAAAACCTGG AATCGCCACG ATCTCTATCT CAGTACGCTG
GTGGTGCGTC CCGGCGATAA ATCTCGTTCC GCGACGCCAA AACGCGCCGT GGGGTTACTA
CACCTACCGC TGGGGGATGA AAACCGCCGC CTCGATCTGG CGCTGGAAAG CCCGGCTAAA
ATGCGCCCGA ATCAGCCGCT CACCGTCAGG GTGAAAGCCA GCGTTAAACA CGGCGAAATG
CCAAAACAGA TCAACGTGCT GGTCTCCGCG GTCGATAGCG GCGTATTGAA TATCACCGAT
TACGCGACGC CGGACCCGTG GCAGGCGTTC TTCGGTCAAA AACGCTACGG TGCGGATATC
TACGATATTT ACGGCCAGGT CATTGAAGGG CAGGGGCGGC TGGCGGCGTT GCGTTTTGGC
GGCGATGGCG ACGACCTTAA GCGCGGCGGA AAACCGCCGG TAAACCATGT CAATATCATC
GCGCAGCAGG CGCAGCCGAT CACGCTCAAT GAGCAGGGCG AAGGGGTCGT AACGCTGCCG
ATTGGCGACT TTAACGGCGA ACTGCGGGTT ATGGCGCAGG CATGGACAGC GGACGATTTT
GGTCGCGGCG AAAGCAAAGT CGTTGTCGCC GCGCCAGTGA TTGCCGAGCT GAATATGCCG
CGTTTTCTGG CGGGAGGGGA TGTTTCGCGA CTGGTGCTGG ACGTCACCAA TCTGACCGAC
CGTCCGCAGA CGCTGAATAT TGCGCTCGCC GCCAGTGGGT TACTGGAACT GCTTAGCCAG
CAGCCGCAAC CGGTCAACCT GGCGCCGGGC GTGCGCACCA CCTTATTCGT TCCGGTACGC
GCGCTGGAAG GTTTTGGCGA AGGCGAAATC CAGGCGACCA TTAGCGGTCT GAATCTGCCG
GGAGAAACCC TCGACGCGCA GCATAAGCAG TGGCAAATCG GCGTGCGTCC GGCCTGGCCT
GCCCAAACGG TAAATAGCGG CATTGCGCTG GCGCCGGGAG AGAGCTGGCA TGTACCAGAG
CAGCATCTGG CAAACGTCTC GCCAGCCACG TTACAGGGAC AACTGCTATT AAGCGGAAAA
CCGCCGCTCA ATCTGGCGCG CTACATTCGC GAGCTGAAAG CATATCCGTA CGGGTGCCTG
GAACAAACCA CCAGTGGGTT ATTCCCGGCG CTGTATACCA ATGCCGCTCA ATTGCAGTCG
CTCGGTATTA CCGGCGATAG CGATGAAAAA CGGCGCGCCG CGGTGGATAT CGGCATCTCC
CGGATACTAC AGATGCAGCG TGATAACGGC GGTTTTGCGC TATGGGATGA AAATGGGGCG
GAAGAGCCCT GGCTAACGGC CTACGCGATG GATTTCCTTA TTCGCGCGGG CGAGCAGGGA
TATAGCGTCC CGCCGGAGGC CATTAATCGG GGCAATGAGC GACTGCTGCG CTATCTGCAG
GATCCCGGCA CGATGCTGAT TCGTTATAGC GATAATACTC AGGCCAGTAC TTTTGCCGCT
CAGGCTTACG CCGCGTTGGT ACTGGCGCGT CAGCAGAAAG CGCCGCTCGG CGCGCTGCGC
GAAATCTGGG AGCGCCATAG TCAGGCGGCT TCAGGACTGC CGCTGATGCA ATTGGGCATC
GCGTTAAACA CGATGGGTGA TGCCAGACGC GGCGAAGAGG CCATTACGCT GGCTCTGAAT
ACGCCGCGTC AGGACGAACG GCAATGGATA GCGGATTACG GCAGTTCTCT GCGCGATAAC
GCTCTGATGT TGTCGCTACT GGAAGAGAAC AACCTCAGAC CGGACGCGCA AAACGCGCTA
TTAAGCTCGC TTTCTGAGCA GGCCTTCGGT CAGCGCTGGC TCTCTACCCA GGAGAACAAT
GCCTTGTTCC TCGCCGCGCA TTCGCGACAG GCCAGCGCGG GCGCCTGGCA GGCGCAGACC
TCGTTAGAGG CGCAGCCGCT GTCGGGCGAC AAGGCGCTGA CCCGTAATCT GGATGCTGAC
CAGTTGGCCG CCCTTGAGGT GACGAACACC GGTAGCCAGC CGCTATGGCT GCGTCTGGAT
AGCAGCGGCT ATCCCTCATC TGCGCCTGAG CCTGCCAGCA ACGTTTTGCA GATTGAACGA
CAAATACTGG GGACCGATGG TCAGCGCAAA TCGCTGTCCT CGTTGCGTAG CGGCGAACTG
GTGCTGGTCT GGTTAACGGT AGTGGCCGAT CGCAATGTGC CGGATGCGCT GGTGGTGGAC
CTGCTCCCGG CCGGGCTGGA GCTGGAAAAC CAGAATCTGG CTGACAGCAG CGCCAGCCTG
CCGGAGAGCG GTAGCGAAGT GCAAAATCTG CTTAATCAGA TGCAGCAGGC GGATATTCAG
TATATGGAAT TCCGCGACGA TCGGTTTGTG GCTGCCGTCG TTGTCAATGA GGGCCAGCCC
GTGACGCTGG TCTACCTGGC GCGCGCGGTA ACGCCGGGGA CGTACCAGCT TGCGCAACCG
CAGGTGGAAT CGATGTACGC GCCTCAGTGG CGGGCAACCG GCGCGAGCGA GGGGTTGCTG
ATTGTGACGC CTTAA
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| Protein sequence | MKHLRVVACM IMLALAGCDN NDKTAPTTKS EAPAVAQPSP AQDPAQLQKL AQQSQGKALT
LLDASEAQLD GAATLVLTFS VPLDPEQDFS RVVHVVDKKS GSVDGAWELA PNLKELRLRH
LEPERVLVVT VDPAVKALNN ATFGKSYEKT ITTRDVQPSV GFASRGSLLP GKIAEGLPVM
ALNVNHVDVN FFRVKPGSLA SFVSQWEYRS SLSNWESDNL LKMADLVYTG RFDLNPARNT
REKLLLPLSD IKPLQQAGVY VAVMNQAGHY NYSNAATLFT LSDIGVSAHR YHNRLDIFTQ
SLENGAAQSG IEIVLLNDKG QTLAQATSDA QGHVQLEADK AAALLLARKE GQTTLLDLTL
PALDLSEFNV AGAPGYSKQF FMFGPRDLYR PGETVILNGL LRDSDGKTLP DQPVKLEVVK
PDGQVMRTVV SQPENGLYRL NYPLDINAPT GLWHVRANTG DNLLRSWDFH VEDFMPERMA
LNLTAQKTPL APADEVKFSV VGYYLYGAPA NGNTLQGQLF LRPLRDAVAA LPGFQFGNIA
EENLSRSLDE VQLTLDKGGR GEVSAASQWQ EAHSPLQVIL QASLLESGGR PVTRRVEQAI
WPADTLPGIR PQFAAKAVYD YRTDTTVNQP IVDEDSNAAF DIVYANAQGE KKAVSGLQVR
LIRERRDYYW NWSESEGWQS QFDQKDLVEG EQTLDLNADE TGKVSFPVEW GAYRLEVKAP
NETVSSVRFW AGYSWQDNSD GSGAARPDRV TLKLDKANYR PGDTMKLHIA APVAGKGYAM
VESSDGPLWW QAIDVPEQGL ELTIPVDKTW NRHDLYLSTL VVRPGDKSRS ATPKRAVGLL
HLPLGDENRR LDLALESPAK MRPNQPLTVR VKASVKHGEM PKQINVLVSA VDSGVLNITD
YATPDPWQAF FGQKRYGADI YDIYGQVIEG QGRLAALRFG GDGDDLKRGG KPPVNHVNII
AQQAQPITLN EQGEGVVTLP IGDFNGELRV MAQAWTADDF GRGESKVVVA APVIAELNMP
RFLAGGDVSR LVLDVTNLTD RPQTLNIALA ASGLLELLSQ QPQPVNLAPG VRTTLFVPVR
ALEGFGEGEI QATISGLNLP GETLDAQHKQ WQIGVRPAWP AQTVNSGIAL APGESWHVPE
QHLANVSPAT LQGQLLLSGK PPLNLARYIR ELKAYPYGCL EQTTSGLFPA LYTNAAQLQS
LGITGDSDEK RRAAVDIGIS RILQMQRDNG GFALWDENGA EEPWLTAYAM DFLIRAGEQG
YSVPPEAINR GNERLLRYLQ DPGTMLIRYS DNTQASTFAA QAYAALVLAR QQKAPLGALR
EIWERHSQAA SGLPLMQLGI ALNTMGDARR GEEAITLALN TPRQDERQWI ADYGSSLRDN
ALMLSLLEEN NLRPDAQNAL LSSLSEQAFG QRWLSTQENN ALFLAAHSRQ ASAGAWQAQT
SLEAQPLSGD KALTRNLDAD QLAALEVTNT GSQPLWLRLD SSGYPSSAPE PASNVLQIER
QILGTDGQRK SLSSLRSGEL VLVWLTVVAD RNVPDALVVD LLPAGLELEN QNLADSSASL
PESGSEVQNL LNQMQQADIQ YMEFRDDRFV AAVVVNEGQP VTLVYLARAV TPGTYQLAQP
QVESMYAPQW RATGASEGLL IVTP
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