| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2699 |
|---|
| Symbol | |
|---|
| ID | 6485595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2619330 |
|---|
| End bp | 2621543 |
|---|
| Gene Length | 2214 bp |
|---|
| Protein Length | 737 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642738031 |
|---|
| Product | inner membrane protein YfgF |
|---|
| Protein accession | YP_002041765 |
|---|
| Protein GI | 194443866 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 0.995527 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAA ATAAAACTTA TATAAATATC AGAGATAAAT GGTGGGGACT ACCGCTCATT
CTCCCTTCGA TTTTACTACC TGTTTTAAGT AGCGCAAATA CTTATGCGCT TACCAGCACT
GGAAATGTGG TTCTTTTTTA CCTGCCGTTA GCTTTTATGC TTAGTCTGAT GCTCTTTTTC
GGCTGGGCAG CACTGCCGGG CATTGTGCTT GCTATCTTCT GGCGCAGATA CCCGCAGACA
GGACTGTATG AAACCCTTTC TGTGACGATG CACTTTATCA TTACTATCGT GCTAAGCTGG
GGCGGCTATC GTGTCTTTTC CCCCCGGCGA AACAATGTTT CCCACGGCGA CGCCCACCTG
TTGTTTCAAC GAATATTCTG GCAGGTATTT TGTTCAGCAA CATTATTTCT GGTCATCTAC
CAGTTTGCTG CTTTTGTTGG CATGTACGAA AGCAAAGCCA GCCTGATGGG GGTAATGCCC
TTTAATATCA ACACGCTGAT TAATTACCAG GCGTTACTGG TCGGTAACCT TGTCGGCGTG
CCATTGTGCT ATTTTATTAT TCGTACTCTC CGCAATCCGC TGCACCTGCG GGGGTATTAT
CAGCAATTAA AGCTACAGAT TGATAGCAAG GCCACTAAAA AAGAGATCGT TATTTGGCTG
GCCGTATTGA CTACACTAAT GTTTATACTG TGTATGCCAT TGACTGATAA TAGTTCAATA
TTTAGTACCA ACTATACGCT TTCGTTATTA TTGCCGGTCA TGCTGTGGGG CGCGATGCGC
TATGGCTATA AGTTTATTTC AATTATCTGG GCCGTCGTGT TAATTACGTC GATTCATTAT
TATCAGCGTT ATATGCCCTG GTATTCAGGT TATGATACGC AATTAGCGAT TACCTCTTCG
AGCTATCTGG TTTTTTCTTT TATTGTTAAT TATATGTCTG TACTGGCCAC GCGTCAGCGC
GTAGTGAGTG GTCGCGCACG GCGGCTGGCC TATCTTGACC CGGTTGTACA TCTTCCCAAT
TTACGTGCGT TAAACCGCGC GCTCCAAAAT GCGCCCTGGT CTACGATCTG TTTTTTACAC
GTGCCGGGCC TGGAGCTATT GGGTAAAAAT TATGGCGTCA TGTTACGCAT CCAGTATAAG
CAAAAGCTCT CTCACTGGAT TACGCCGATG CTGGCCTCAA ATGAGTGCGT CTACCAGATG
TCAGGGCACG ACCTGGTGCT GCGTCTTAAT ACAGAGTCGC ATCAGCAGCG TATTGAAGCG
CTGGATAAAC ATATTAAGCA GTTTCGGTTT ATCTGGGATG GACTGCCGCT ACAGCCGCCT
GTCGGCGTGA GCTACTGCTG CGTGCGTTCT CCGGTTAGCC ACCTTTATCT GCTGTTGGGC
GAATTAAGCA CCAGTTCCGA TCTTTCGTTG ACGACTAACG CGCCGGAGGA TTTACAGCGG
CGCGGCGCAA TGCACCTGCA GCGCGATTTG AAGGGCAGAA TTGCGATGAT GAATCGGCTG
CAACAGGCGT TGGAGCACGA TCATTTTTTC CTGATGGCGC AGCCTATTTC CGGTGTTCGT
GGGGACGTTT ACCATGAAAT CTTACTGCGA CTCAGGGATG ACAACGGCGA CGTTATCAAC
CCGGACAATT TTTTACCCGT GGCGCATGAG TTTGGATTGT CTTCCGCTAT CGATCTTTGG
GTGATTGAAA ACACGCTGCG GTTTATGGCG GCCAGCCGGG AATATATGCC CGCGCATCGT
TTTGCCATTA ATCTGTCGCC AACATCGGTA TGCCGCGCTC GTTTCCCTGC AGAAGTTAAG
CAGCTGCTTA CGCAATATCA GGTTGAACCC TGGCAACTGG TTTTTGAGGT AACGGAAAGC
AACTCTCTCA CCAATGCTGA GCAGGCGCAG TTGACGCTGG GACAGCTACA GCAGTTTGGC
TGTCAGATAG CGATTGATGA TTTCGGTACT GGCTACGCCA GCTATGCGCG GCTGAAAAAC
GTTGACGCCG ATATTCTTAA AATTGATGGC AGTTTTATTC GCAATATAGT GTCAAACAGT
CTCGATTATC AGATTGTGGC TTCTATTTGT CATTTAGCGC GAATGAAAAA TATGCAGGTC
GTCGCGGAGT ATGTCGAGAG CGAAGAAATA CGAAGCGTAG TGCTCTCGTT GGGGATCGAC
TATCTTCAGG GATATTTAAT TGGCGAGCCG CAGCTATTAT CTGAGATTCA GTAA
|
|---|
| Protein sequence | MKLNKTYINI RDKWWGLPLI LPSILLPVLS SANTYALTST GNVVLFYLPL AFMLSLMLFF
GWAALPGIVL AIFWRRYPQT GLYETLSVTM HFIITIVLSW GGYRVFSPRR NNVSHGDAHL
LFQRIFWQVF CSATLFLVIY QFAAFVGMYE SKASLMGVMP FNINTLINYQ ALLVGNLVGV
PLCYFIIRTL RNPLHLRGYY QQLKLQIDSK ATKKEIVIWL AVLTTLMFIL CMPLTDNSSI
FSTNYTLSLL LPVMLWGAMR YGYKFISIIW AVVLITSIHY YQRYMPWYSG YDTQLAITSS
SYLVFSFIVN YMSVLATRQR VVSGRARRLA YLDPVVHLPN LRALNRALQN APWSTICFLH
VPGLELLGKN YGVMLRIQYK QKLSHWITPM LASNECVYQM SGHDLVLRLN TESHQQRIEA
LDKHIKQFRF IWDGLPLQPP VGVSYCCVRS PVSHLYLLLG ELSTSSDLSL TTNAPEDLQR
RGAMHLQRDL KGRIAMMNRL QQALEHDHFF LMAQPISGVR GDVYHEILLR LRDDNGDVIN
PDNFLPVAHE FGLSSAIDLW VIENTLRFMA ASREYMPAHR FAINLSPTSV CRARFPAEVK
QLLTQYQVEP WQLVFEVTES NSLTNAEQAQ LTLGQLQQFG CQIAIDDFGT GYASYARLKN
VDADILKIDG SFIRNIVSNS LDYQIVASIC HLARMKNMQV VAEYVESEEI RSVVLSLGID
YLQGYLIGEP QLLSEIQ
|
|---|
| |