Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2687 |
Symbol | |
ID | 6482356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2605978 |
End bp | 2607141 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642738019 |
Product | transcriptional regulator, CdaR |
Protein accession | YP_002041753 |
Protein GI | 194444173 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3835] Sugar diacid utilization regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAGGGT ATACCGCGCG GCAAATTGTA CAGCGAGCCA TGAAAATTAT TCCTTACTCG GTAAACGTCA TGGATGAGCA TGGCGTCATT ATCGCGTCTG GCGAACCTTC GCGGCTTCGC CAGCGTCACG AAGGGGCCAT TCTGGCGCTG AAGGAAAACC GTATTGTAGA AATTGATTCC GCTACCGCCA ATCAGCTTAA AGGCGTGCGA TCCGGCATTA ATCTTCCCAT CTCTTTTCAT GAACAGCTTA TCGGCGTGGT CGGCATTACC GGCGAGCCGG AGGAGGTTCG TGCGTATGCC GAGCTGGTTA AAATGGCGGC GGAGCTGGTG ATCGAGCATA TGGTGCTGAT CGAACAGCGA CAATGGGATA AACGCTATCG CGAAGAGCTG ATCAACCAAT TGATTTTGCG AGAAAATTCA ACAGAGTCGT TGCGCTCCAT GGCGGCCTAT CTGGGTATTG ATCTGGCGGT TCCCAGAGTG GTGCTGATTA TTGAACTTTC CCAGCCGGAT CGCGAAGCGC TGCGCAATGT AATGGATTAT TTCGAGAATC ACGCGCGTAA CCATTTGGTG ACGTTTACCG AATTTAATGA ATTAATCATT ATTAAGCCTA TCACGTTAAA AGAGGGAAAG TGGAATACCC GCCAGGAAAT GGGCGAATTG CAGATTTTTA AATCATGGGC TGCATCATCG GGCTTTAGCC GTATTTTGGT TGGGGGCTAT TTTGCCGGCG AGACGGGATT GCACCGATCT TTGCTCACAG CGAGAGCCAC GCAGGCGATG GCGAAAAGAC AAAAGCTGCG CAGCCAGTAC ATTTTTTATC ATGACCACGC GCTTCCCGCG CTGCTAAGCG GGCTGTCTGA AAGTTGGCAA GTGCAGGAGT TATCGCGTCT GTGGCTGCAA CTGGCGCAAC ATGACGCGAA AGGCGTATTG CAACAGACGC TGCGGACCTG GTTTGAACAT AATTGTGACC TGACGCAAAC GGCCAAAGCA TTGCATATTC ATGTGAATAC ATTGCGCTAT CGCTTACAGC GCTGTGAGGA TATTACGCAC ATAAAAATCA ACGAGTTAAA AAGTACGCTT TGGCTTTATA TCGGTATGGA GCTCCAGGCC GAATCTGTAC CGTCCGACAA GTTACCGCTG CCAGGTCGAA TCGAAATTTG TTGA
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Protein sequence | MKGYTARQIV QRAMKIIPYS VNVMDEHGVI IASGEPSRLR QRHEGAILAL KENRIVEIDS ATANQLKGVR SGINLPISFH EQLIGVVGIT GEPEEVRAYA ELVKMAAELV IEHMVLIEQR QWDKRYREEL INQLILRENS TESLRSMAAY LGIDLAVPRV VLIIELSQPD REALRNVMDY FENHARNHLV TFTEFNELII IKPITLKEGK WNTRQEMGEL QIFKSWAASS GFSRILVGGY FAGETGLHRS LLTARATQAM AKRQKLRSQY IFYHDHALPA LLSGLSESWQ VQELSRLWLQ LAQHDAKGVL QQTLRTWFEH NCDLTQTAKA LHIHVNTLRY RLQRCEDITH IKINELKSTL WLYIGMELQA ESVPSDKLPL PGRIEIC
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