Gene SNSL254_A2679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2679 
Symbol 
ID6484962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp2598451 
End bp2599314 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content56% 
IMG OID642738011 
Productzinc protease 
Protein accessionYP_002041745 
Protein GI194446610 
COG category[R] General function prediction only 
COG ID[COG2321] Predicted metalloprotease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGC AAGGGCGTCG TGAAAGTAAC AATGTAGAGG ACAGACGTAA TCGGCCAGGC 
GGCCCCTCGC TGGGTGGCCC TGGCTTTCGT CTTCCGCGCG GAAAAGGCGG CATCATTCTG 
TTGGTGGTGG TGTTGGTCGC AGGGTACTAT GGGGTGGATT TAACCGGTCT GTTGACCGGT 
CAGCCGGTTT CGCAGCAGCA GTCGACGCGT TCGATAAGCC CCAATGATGA TGAAGCGGCA 
AAATTTACCT CGGTGATTCT GGCGACGACC GAAGATACCT GGGGGCAACT CTTTCAAAAC 
ATGGGGCGCG GCTATCAGCA GCCAAAACTG GTGATGTACC GTGGTATGAC GCGCACCGGC 
TGTGGCGCGG GTCAGTCCGT GATGGGGCCG TTTTACTGCC CGGCGGACGG CACCGTTTAT 
ATCGATCTCT CATTTTACGA TGATATGAAA AATAAGCTGG GCGCGGACGG TGATTTTGCT 
CAGGGTTATG TCATCGCCCA CGAAGTCGGC CACCACGTAC AAAAACTGTT AGGTATTGAG 
CCTAAAGTAC GCCAGTTACA GCAAAACGCG TCGCAAACGG AGGTGAATCG CCTTTCGGTG 
CGCATGGAGC TACAGGCGGA TTGCTTTGCC GGCGTGTGGG GACACAGTAT GCAGCAGCAA 
GGTGTACTGG AGGCGGGCGA TCTGGAAGAG GCGCTCAATG CCGCACAGGC TATCGGCGAC 
GATCGCTTAC AGCAACAGGG GCAGGGGCGC GTCGTGCCGG ATAGTTTTAC CCACGGCACC 
TCAGAACAGC GCTACAGCTG GTTTAAGCGT GGATTTGACA GCGGTGACCC GGCGCAATGT 
AATACGTTTG GCAAAAACTT TTGA
 
Protein sequence
MRWQGRRESN NVEDRRNRPG GPSLGGPGFR LPRGKGGIIL LVVVLVAGYY GVDLTGLLTG 
QPVSQQQSTR SISPNDDEAA KFTSVILATT EDTWGQLFQN MGRGYQQPKL VMYRGMTRTG 
CGAGQSVMGP FYCPADGTVY IDLSFYDDMK NKLGADGDFA QGYVIAHEVG HHVQKLLGIE 
PKVRQLQQNA SQTEVNRLSV RMELQADCFA GVWGHSMQQQ GVLEAGDLEE ALNAAQAIGD 
DRLQQQGQGR VVPDSFTHGT SEQRYSWFKR GFDSGDPAQC NTFGKNF