| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2676 |
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| Symbol | dapE |
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| ID | 6486199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2595035 |
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| End bp | 2596162 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642738008 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_002041742 |
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| Protein GI | 194446769 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTGCC CGGTTATTGA GCTGACACAG CAACTTATTC GTCGCCCCTC CCTGAGTCCG
GATGACGCAG GCTGTCAGGC ATTAATGATT GAACGCCTGC GTAAAATCGG TTTTACCATT
GAGCATATGG ATTTTGGCGA CACGCAAAAT TTTTGGGCAT GGCGTGGGCG TGGCGAAACG
CTGGCGTTCG CCGGGCATAC TGACGTCGTA CCGGCTGGCG ATGTCGATCG CTGGATCAAT
CCGCCGTTTG AACCTACGAT TCGCGACGGA ATGTTGTTCG GTCGCGGCGC GGCGGATATG
AAAGGTTCAC TGGCGGCCAT GGTGGTGGCT GCTGAACGTT TTGTTGCGCA GCATCCTCAT
CACCGGGGCC GCCTCGCGTT TTTGATTACC TCTGATGAGG AAGCCAGCGC AAAAAATGGC
ACCGTAAAGG TGGTTGAAGC GCTGATGGCC CGTAACGAGC GGCTGGATTA CTGTCTGGTC
GGCGAACCTT CCAGTACTGA AATTGTGGGC GATGTCGTCA AAAACGGGCG TCGCGGTTCC
CTCACCTGTA ACCTCACTAT TCATGGCGTT CAGGGGCACG TCGCCTATCC GCATCTGGCG
GATAACCCTG TTCATCGCGC TGCGCCTTTT CTCAATGAAC TGGTCGCTAT CGAGTGGGAT
CGGGGCAATG ACTTTTTCCC GGCCACCAGT ATGCAGGTAG CCAATATCCA GGCAGGCACC
GGCAGCAATA ATGTCATTCC CGGTGAACTG TTCGTGCAGT TTAACTTCCG TTTCAGCACG
GAACTGACCG ATGAGATGAT CAAAGAGCGG GTACATGCGC TGCTTGAGAA GCATCAGCTA
CGCTATACCG TAGACTGGTG GCTTTCCGGC CAGCCGTTCC TGACCGCACG CGGCAAGCTG
GTGGACGCGG TGGTAAACGC CATTGAGCAC TATAATGAAA TTAAACCGCA ATTACTGACG
ACGGGCGGTA CGTCCGACGG ACGTTTTATC GCCCGTATGG GAGCGCAGGT GGTAGAACTG
GGGCCGGTGA ACGCCACCAT TCATAAAATT AATGAATGTG TGAATGCCGC CGATCTCCAG
CTACTGGCCC GTATGTATCA ACGCATTATG GAACAGCTCG TCGCCTGA
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| Protein sequence | MSCPVIELTQ QLIRRPSLSP DDAGCQALMI ERLRKIGFTI EHMDFGDTQN FWAWRGRGET
LAFAGHTDVV PAGDVDRWIN PPFEPTIRDG MLFGRGAADM KGSLAAMVVA AERFVAQHPH
HRGRLAFLIT SDEEASAKNG TVKVVEALMA RNERLDYCLV GEPSSTEIVG DVVKNGRRGS
LTCNLTIHGV QGHVAYPHLA DNPVHRAAPF LNELVAIEWD RGNDFFPATS MQVANIQAGT
GSNNVIPGEL FVQFNFRFST ELTDEMIKER VHALLEKHQL RYTVDWWLSG QPFLTARGKL
VDAVVNAIEH YNEIKPQLLT TGGTSDGRFI ARMGAQVVEL GPVNATIHKI NECVNAADLQ
LLARMYQRIM EQLVA
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