Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2664 |
Symbol | |
ID | 6484850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2577320 |
End bp | 2579599 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642737996 |
Product | malic enzyme |
Protein accession | YP_002041730 |
Protein GI | 194446504 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase [COG0281] Malic enzyme |
TIGRFAM ID | [TIGR00651] phosphate acetyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGAGC AGTTAAAACA AAGCGCCCTT GATTTCCACG AATTTCCGGT ACCCGGTAAA ATTCAGGTTT CTCCGACTAA GCCCCTTGCC ACCCAACGCG ATCTGGCGTT GGCTTACTCG CCAGGCGTGG CGGCACCCTG CCTGGAAATC GAAAAAGATC CGCTGGCAGC CTACAAATAC ACCGCGCGTG GCAACCTTGT CGCGGTCATT TCCAACGGTA CAGCGGTGCT GGGGTTAGGC AACATTGGCG CGCTGGCCGG CAAGCCGGTC ATGGAAGGCA AAGGCGTTCT GTTTAAAAAA TTCGCCGGCA TCGATGTGTT TGACATTGAA GTCGATGAGC TTGATCCGGA CAAATTTATC AATGTGGTCG CAGCGCTGGA GCCGACCTTT GGCGGCATTA ACCTCGAAGA CATTAAAGCG CCGGAATGTT TCTATATTGA ACAGAAACTG CGCGAGCGCA TGAACATCCC GGTTTTCCAT GACGATCAGC ACGGAACGGC GATCATCAGT ACGGCCGCCA TTCTTAATGG CCTGCGAGTC GTAGAGAAAA ATATTTCCGA CGTGCGGATG GTCGTCTCCG GTGCAGGGGC GGCGGCAATC GCTTGTATGA ACCTGCTGGT CGCGTTGGGG ATGCAAAAGC ACAACATCGT GGTGTGCGAC TCTAAGGGCG TTATTTACAA AGGCCGTGAG CCGAATATGG CGGAGACCAA AGCGGCCTAT GCGGTGGACG ACAGCGGCAA GCGCACGCTG GATGAGGTCA TTGACGGCGC GGATATTTTC CTCGGCTGTT CAGGCCCGAA AGTGCTGACT CAGGAGATGG TGAAGAAAAT GGCCCGCGCG CCAATGATTC TGGCGCTGGC TAACCCGGAA CCGGAAATTC TGCCGCCGCT GGCGAAAGAA GTGCGTCCGG ACGCCATCAT CTGTACCGGT CGTTCCGACT ATCCGAACCA GGTGAACAAC GTATTGTGCT TCCCGTTTAT CTTCCGCGGC GCACTGGACG TCGGCGCGAC GGCGATCAAC GAAGAGATGA AACTGGCGGC GGTCCGTGCG ATTGCCGAGC TGGCGCACGC CGAACAGAGC GAAGTGGTGG CCTCGGCCTA TGGCGATCAG GACCTGAGCT TTGGGCCGGA ATACATTATT CCGAAACCGT TTGACCCGCG TCTGATTGTC AAAATCGCTC CAGCGGTCGC GAAAGCGGCA ATGGATTCCG GCGTGGCGAC GCGCCCGATT GCTGACTTTG ATGCCTATAT CGATAAACTG ACCGAGTTTG TCTACAAAAC CAACCTGTTC ATGAAGCCGA TCTTCTCGCA GGCACGCAAA GATCCGAAGC GCGTAGTGCT GCCGGAAGGG GAAGAGGCGC GCGTGCTGCA CGCAACCCAG GAGTTGATCA CCCTGGGGCT GGCGAAACCC ATCCTGATCG GGCGTCCGAG CGTGATCGAA ATGCGTATCC AGAAACTGGG GCTACAGATC AAAGCGGGCG TTGATTTCGA GATCGTGAAT AATGAATCCG ATCCGCGCTT CAAAGAGTAC TGGAGCGAGT ATTACCAGAT CATGAAGCGT CGCGGGGTAA CTCAGGAACA GGCGCAGCGT GCGATGATCG GCAACCATAC GGCCATTGGC GCGATCATGG TGCAGCGTGG GGAAGCGGAT GCGATGATCT GCGGCACCAT CGGCGACTAC CATGAGCATT TCAGCGTCGT GAAAGCCGTC TTTGGCTACC GTGACGGCGT GCATACGGCA GGGGCGATGA ACGCCTTACT GCTGCCAAGC GGCAACACTT TTATCGCCGA TACTTATGTT AACGAAGATC CCACGCCGGA ACAGTTGGCG GAGATCGCCG TAATGGCGGC GGAAACCGTT CGCCGCTTTG GTATTGAGCC GAAAGTCGCG CTGTTGTCGC ACTCTAACTT TGGTTCCTCA AATTCGCTGT CCGCCAGCAA AATGCGCGAA ACCCTTGAGC GGGTACGCGA ACGAGCGCCC GATCTGATGA TTGACGGTGA GATGCACGGT GATGCGGCGT TGGTGGAAAG TATTCGTAAT GACCGGATGC CGGATAGCCC GCTGAAGGGA GCCGCCAATA TTCTGGTGAT GCCGAATATG GAAGCCGCCC GCATTAGTTA CAACTTACTC CGCGTCTCCA GTTCCGAAGG CGTCACGGTC GGCCCGGTCC TGATGGGCGT GTCTAAACCG GTACATGTAT TAACGCCGAT CGCCTCTGTA CGCCGTATCG TGAATATGGT GGCGTTAGCG GTAGTTGAAG CGCAAACCAC GCCGCTTTAA
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Protein sequence | MDEQLKQSAL DFHEFPVPGK IQVSPTKPLA TQRDLALAYS PGVAAPCLEI EKDPLAAYKY TARGNLVAVI SNGTAVLGLG NIGALAGKPV MEGKGVLFKK FAGIDVFDIE VDELDPDKFI NVVAALEPTF GGINLEDIKA PECFYIEQKL RERMNIPVFH DDQHGTAIIS TAAILNGLRV VEKNISDVRM VVSGAGAAAI ACMNLLVALG MQKHNIVVCD SKGVIYKGRE PNMAETKAAY AVDDSGKRTL DEVIDGADIF LGCSGPKVLT QEMVKKMARA PMILALANPE PEILPPLAKE VRPDAIICTG RSDYPNQVNN VLCFPFIFRG ALDVGATAIN EEMKLAAVRA IAELAHAEQS EVVASAYGDQ DLSFGPEYII PKPFDPRLIV KIAPAVAKAA MDSGVATRPI ADFDAYIDKL TEFVYKTNLF MKPIFSQARK DPKRVVLPEG EEARVLHATQ ELITLGLAKP ILIGRPSVIE MRIQKLGLQI KAGVDFEIVN NESDPRFKEY WSEYYQIMKR RGVTQEQAQR AMIGNHTAIG AIMVQRGEAD AMICGTIGDY HEHFSVVKAV FGYRDGVHTA GAMNALLLPS GNTFIADTYV NEDPTPEQLA EIAVMAAETV RRFGIEPKVA LLSHSNFGSS NSLSASKMRE TLERVRERAP DLMIDGEMHG DAALVESIRN DRMPDSPLKG AANILVMPNM EAARISYNLL RVSSSEGVTV GPVLMGVSKP VHVLTPIASV RRIVNMVALA VVEAQTTPL
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