Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2647 |
Symbol | |
ID | 6483633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2562112 |
End bp | 2563164 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642737980 |
Product | transcriptional regulator EutR |
Protein accession | YP_002041714 |
Protein GI | 194445351 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAGA CCCGTACAGC GAATTTGCAC CATCTTTATC ATGAAGCGTT ACCCGAAGAC GTTAAACTTA CGCCCAGAGT CGAGGTGGAC AATGTTCATC AGCGACGGAC GACGGATGTC TATGAACATG CTCTGACTAT CACCGCCTGG CAGCAGATCT ACGATCAGTT ACACCCGGGT AAATTTCATG GCGAGTTCAC GGAAATCCTG CTTGATGAGA TTCAGGTGTT CCGTGAATAC ACCGGCCTGG CGCTGCGTCA GTCGTGTCTG GTTTGGCCAA ACTCTTTCTG GTTTGGTATT CCGGCGACGC GCGGCGAACA GGGATTTATC GGCGCGCAGG GGCTCGGCAG CGCCGAGATT GCCACCCGAC CGGGAGGCAC CGAGTTTGAA CTGAGCACGC CGGATGATTA CACCATTCTG GGCGTCGTTA TCTCGGAAGA TGTTATTTCC CGTCAGGCCA CGTTTTTGCA TAACCCGGAA AGGGTGCTGC ATATGCTGCG TAACCAGCTA GCGCTGGAGG TAAAAGAGCA GCATAAAGCA GCGCTGTGGG GCTTTGTGCA GCAGGCGCTG GCCACCTTCA GCGAGAGTCC TGAAACCCTG CATCAACCTG CGGTGCGTAA GGTCTTGAGT GATAATTTGT TGCTGGCGAT GGGCACGATG CTGGAAGAGG CGAAGCCGAT TCATAGCGCC GAGAGCATCA GCCATCAGGG ATATCGTAGG CTACTGTCGC GGGCGCGGGA ATATGTGCTG GAAAATATGT CGGAGCCGCT GACGGTGCTC GACTTATGTA ACCAGCTACA CGTAAGCCGT CGCACGCTGC AAAATGCGTT TCACGCCATT TTGGGCATTG GCCCCAATGC GTGGCTGAAA CGTATTCGCT TAAACGCAGT ACGCCGGGAA CTGATTAGCC CGTGGTCGCA GAGCACCACG GTCAAAGATG CCGCGATGCA GTGGGGATTC TGGCATTTGG GGCAATTTGC CACCGATTAT CAGCAATTAT TTGCCGAAAA ACCGTCGTTG ACGCTGCATC AGCGGATGCG GCAATGGGCT TGA
|
Protein sequence | MKKTRTANLH HLYHEALPED VKLTPRVEVD NVHQRRTTDV YEHALTITAW QQIYDQLHPG KFHGEFTEIL LDEIQVFREY TGLALRQSCL VWPNSFWFGI PATRGEQGFI GAQGLGSAEI ATRPGGTEFE LSTPDDYTIL GVVISEDVIS RQATFLHNPE RVLHMLRNQL ALEVKEQHKA ALWGFVQQAL ATFSESPETL HQPAVRKVLS DNLLLAMGTM LEEAKPIHSA ESISHQGYRR LLSRAREYVL ENMSEPLTVL DLCNQLHVSR RTLQNAFHAI LGIGPNAWLK RIRLNAVRRE LISPWSQSTT VKDAAMQWGF WHLGQFATDY QQLFAEKPSL TLHQRMRQWA
|
| |