Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2644 |
Symbol | amiA |
ID | 6486245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2559381 |
End bp | 2560250 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642737977 |
Product | N-acetylmuramoyl-l-alanine amidase I |
Protein accession | YP_002041711 |
Protein GI | 194445656 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTT TTAAACTCCT AAAAACTCTC ACTTCGCGCC GCCAGGTACT CAAAACAGGT CTGGCGGCCC TGACGCTGTC AGGTATGTCG CACGCAATAG CCAAAGAAGA AACGCTAAAA ACCAGTAATG GTCACAGCAA ACCCAAAACC AAAAAAACCG GCAGTAAACG GCTGGTGATG CTCGACCCCG GACACGGCGG CATCGATACC GGCGCGATTG GCCGCAACGG TTCTCAGGAA AAACACGTCG TGCTGGCAAT TGCCAAAAAC GTGCGCGCTA TTTTGCGAAA TCACGGAATC GATGCGCGTT TAACCCGGAC AGGGGATACC TTTATTCCGC TGTACGATCG GGTGGAAATC GCCCATAAGC ACGGCGCGGA TCTGTTTATG TCCATTCATG CCGATGGTTT TACCAACCCG AAAGCAGCGG GCGCTTCCGT TTTTGCGCTT TCCAACCGCG GGGCCAGTAG CGCCATGGCG AAGTATCTCT CCGAGCGTGA AAACCGCGCG GACGAAGTGG CGGGTAAAAA AGCCACTGAC CGGGATCATC TATTACAACA AGTTTTGTTT GATCTGGTGC AAACCGATAC GATTAAAAAC AGTCTGACGC TGGGTTCGCA TATTCTCAAG AAAATCAAAC CTATACATAA ATTACACAGC CGCACTACCG AACAAGCGGC TTTCGTGGTG CTAAAATCAC CGTCAATTCC GTCGGTGCTG GTCGAAACCT CGTTTATTAC CAATCCGGAA GAAGAACGCC TGCTGGGCAC GACGGCGTTT CGCCAGAAAA TCGCTACGGC GATCGCCAAC GGCATCATCA GTTATTTTCA CTGGTTTGAT AATCAGAAAG CACACACGAA GAAACGGTAA
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Protein sequence | MSTFKLLKTL TSRRQVLKTG LAALTLSGMS HAIAKEETLK TSNGHSKPKT KKTGSKRLVM LDPGHGGIDT GAIGRNGSQE KHVVLAIAKN VRAILRNHGI DARLTRTGDT FIPLYDRVEI AHKHGADLFM SIHADGFTNP KAAGASVFAL SNRGASSAMA KYLSERENRA DEVAGKKATD RDHLLQQVLF DLVQTDTIKN SLTLGSHILK KIKPIHKLHS RTTEQAAFVV LKSPSIPSVL VETSFITNPE EERLLGTTAF RQKIATAIAN GIISYFHWFD NQKAHTKKR
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