Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2612 |
Symbol | |
ID | 6487005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2531431 |
End bp | 2532315 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642737945 |
Product | DNA-binding transcriptional activator XapR |
Protein accession | YP_002041679 |
Protein GI | 194446371 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0177144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGAG CCCATCGTAT TGATCTAAAG CTATTACGTT ATTTCCTCGC TGTTGCAGAA GAATTGCATT TTGGCCGGGC TGCTGCCCGG TTAAATATGT CACAACCTCC CTTGAGTATC CATATCAAAG AACTTGAACA GCAACTGGGT ACATTGCTGT TTATCCGTCA TTCCCGCAGC GTTGCATTAA CCCATGCCGG GAAAGTTTTG ATGGAAGAGT CTCGTCGCTT GTTAGCCAAT GCAAATCAGG CGCTGGCGCG AGTGGAGCAG ATTGGTCGCG GTGAAGCGGG GCGCATTGAA CTGGGTGTGG TTGGTACGGC GCTGTGGGGA AGAATGCGTC CTGCGATGCG TCACTTTTTG AAAGCAAATC CCAATGTTGA AGTACTTTTT CGCGAAAAGT CTCCAGGTAT GCAAATGGCG TTGTTAGAGC GTCGGGAACT TGATGCAGGG ATCTGGCGTA TGGCTATCGA ACCAGCAGTC GGTTTTACCA GCATACGTTT GCATGAATCT GCATTCATGG TTGCAGTTCC GGAAGATCAC GATCTGGCAT CCAGAGATTC TGTGCCGCTG TCGGCGTTGC GCAATGAATA TTTTGTTACG TTGCCTTCCG TACATTCTGA TTGGGGATTT TTACAACGTG TATGCCAACA GGCGGGTTTC TCGCCAATGA TTATTCGGGA AGTGGTTGAG CCGCAAACGG TGTTGGCGAT GATCAGTATG GGGATCGGGA TTACGTTGAT GGCTGATGGC TATGCGCAAA TGAGCTGGCC GGGTGTGGTG TTCCGTCCGT TAGAGGAACG TATTCCGGCG GATTTGTATA TTGTGTATGA CCAGCAGCAG GCAACGCCAG CACTGGAGAA ACTGGTGGCG GCGTTGACGG TATGA
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Protein sequence | MERAHRIDLK LLRYFLAVAE ELHFGRAAAR LNMSQPPLSI HIKELEQQLG TLLFIRHSRS VALTHAGKVL MEESRRLLAN ANQALARVEQ IGRGEAGRIE LGVVGTALWG RMRPAMRHFL KANPNVEVLF REKSPGMQMA LLERRELDAG IWRMAIEPAV GFTSIRLHES AFMVAVPEDH DLASRDSVPL SALRNEYFVT LPSVHSDWGF LQRVCQQAGF SPMIIREVVE PQTVLAMISM GIGITLMADG YAQMSWPGVV FRPLEERIPA DLYIVYDQQQ ATPALEKLVA ALTV
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