| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2597 |
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| Symbol | |
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| ID | 6483044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2519321 |
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| End bp | 2520973 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642737930 |
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| Product | indole-3-pyruvate decarboxylase |
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| Protein accession | YP_002041670 |
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| Protein GI | 194445213 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | [TIGR03393] indolepyruvate decarboxylase, Erwinia family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.380997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACC CCTATACCGT GGCCGACTAT TTGCTGGACA GACTGGCAGG ATGCGGCATT
GGCCATCTTT TTGGCGTACC GGGCGATTAT AACTTGCAGT TTCTTGACCA TGTGATTGAC
CACCCGACCC TGCGTTGGGT GGGATGCGCC AATGAGCTGA ACGCCGCTTA TGCCGCGGAC
GGCTATGCGC GCATGTCGGG CGCTGGAGCG CTACTCACTA CCTTTGGCGT GGGAGAACTT
AGCGCTATTA ACGGTATCGC GGGCAGTTAC GCGGAATATG TCCCGGTCTT GCATATCGTC
GGCGCGCCCT GTAGCGCTGC GCAGCAGCGA GGCGAATTGA TGCACCACAC CCTCGGTGAC
GGCGATTTTC GTCATTTTTA TCGCATGAGC CAGGCGATAT CCGCTGCCAG CGCAATATTA
GATGAACAGA ACGCCTGTTT CGAGATTGAC CGCGTGTTGG GTGAAATGCT TGCCGCACGC
AGGCCAGGAT ACATCATGTT GCCCGCCGAT GTGGCGAAAA AAACGGCCAT CCCGCCTACG
CAGGCGCTGG CGTTGCCCGT GCATGAAGCG CAAAGCGGCG TGGAGACGGC TTTTCGTTAC
CACGCCCGTC AGTGCCTGAT GAACAGTCGG CGCATTGCGC TATTGGCCGA CTTTCTTGCC
GGGCGTTTTG GTTTACGACC ACTGTTGCAA CGCTGGATGG CGGAAACGCC CATCGCTCAT
GCCACACTAC TGATGGGGAA GGGGCTTTTT GATGAACAGC ACCCGAACTT CGTTGGCACC
TATAGCGCAG GCGCCAGCAG CAAAGAAGTG CGTCAGGCCA TAGAGGACGC CGATAGGGTT
ATCTGCGTCG GCACCCGTTT TGTCGATACC CTTACGGCCG GATTCACCCA ACAATTACCG
GCGGAACGCA CGCTGGAGAT TCAGCCTTAC GCGTCGCGCA TCGGCGAAAC CTGGTTCAAC
CTCCCGATGG CGCAGGCGGT GTCTACGCTG CGCGAACTGT GCCTGGAATG CGCTTTTGCG
CCGCCGCCGA CGCGTTCCGC CGGACAGCCA GTGCGGATTG ATAAGGGAGA ACTGACCCAG
GAAAGCTTCT GGCAAACCTT ACAGCAGTAT CTCAAACCCG GAGATATTAT CCTTGTCGAC
CAGGGGACTG CAGCTTTTGG CGCTGCCGCG CTGTCGCTTC CTGACGGCGC GGAAGTTGTG
GTACAGCCGC TGTGGGGATC TATCGGCTAT TCCTTGCCCG CCGCGTTTGG CGCGCAAACC
GCCTGCCCCG ATCGGCGGGT GATTCTGATT ATTGGCGATG GCGCGGCGCA GCTCACGATT
CAGGAGATGG GCTCGATGTT ACGCGACGGG CAGGCGCCGG TCATCCTGCT GCTCAACAAT
GACGGCTATA CCGTAGAGCG CGCCATTCAC GGCGCGGCCC AGCGGTACAA CGACATCGCG
AGCTGGAACT GGACGCAGAT ACCACCGGCG CTAAACGCGG CGCAACAGGC GGAGTGCTGG
CGGGTGACGC AGGCTATCCA ACTGGCAGAG GTCCTCGAAC GTCTGGCGCG CCCACAACGT
CTGTCATTTA TTGAAGTGAT GTTGCCAAAA GCCGATCTGC CGGAATTACT GCGTACCGTG
ACCCGGGCGC TGGAAGCCCG CAACGGGGGA TAA
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| Protein sequence | MQNPYTVADY LLDRLAGCGI GHLFGVPGDY NLQFLDHVID HPTLRWVGCA NELNAAYAAD
GYARMSGAGA LLTTFGVGEL SAINGIAGSY AEYVPVLHIV GAPCSAAQQR GELMHHTLGD
GDFRHFYRMS QAISAASAIL DEQNACFEID RVLGEMLAAR RPGYIMLPAD VAKKTAIPPT
QALALPVHEA QSGVETAFRY HARQCLMNSR RIALLADFLA GRFGLRPLLQ RWMAETPIAH
ATLLMGKGLF DEQHPNFVGT YSAGASSKEV RQAIEDADRV ICVGTRFVDT LTAGFTQQLP
AERTLEIQPY ASRIGETWFN LPMAQAVSTL RELCLECAFA PPPTRSAGQP VRIDKGELTQ
ESFWQTLQQY LKPGDIILVD QGTAAFGAAA LSLPDGAEVV VQPLWGSIGY SLPAAFGAQT
ACPDRRVILI IGDGAAQLTI QEMGSMLRDG QAPVILLLNN DGYTVERAIH GAAQRYNDIA
SWNWTQIPPA LNAAQQAECW RVTQAIQLAE VLERLARPQR LSFIEVMLPK ADLPELLRTV
TRALEARNGG
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