Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2585 |
Symbol | |
ID | 6483134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2506231 |
End bp | 2507478 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642737919 |
Product | phosphoglycerate transport system transcriptional regulatorpgtA |
Protein accession | YP_002041659 |
Protein GI | 194442346 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.238363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAATG ATGAATGTTC TATTTTGCTG ATTGATGATG ACGTTGATGT ACTTGACGCC TATACCCAAA TGCTTGAGCA GGCAGGCTAC CGCGTGCGTG GCTTTACCCA TCCTTTCGAG GCCAAAGAGT GGGTAAAAGC GGATTGGGAG GGGATCGTTT TGAGCGATGT GTGTATGCCG GGGTGTTCCG GTATCGATCT TATGACGCTG TTTCATCAGG ATGACGATCA ACTGCCAATC TTATTGATTA CCGGACATGG CGATGTACCG ATGGCGGTTG ATGCGGTGAA AAAGGGCGCC TGGGATTTTC TGCAAAAACC CGTCGATCCG GGCAAACTGT TGATATTAAT TGAAGACGCG CTACGCCAGC GCCGGTCGGT CATTGCACGG CGGCAATATT GCCAGCAGAC GTTACAGGTT GAACTGATTG GGCGCAGCGA GTGGATGAAT CAGTTTCGAC AACGGTTACA ACAACTGGCG GAAACGGACA TTGCCGTATG GTTTTACGGT GAGCATGGCA CAGGACGTAT GACTGGCGCC CGTTATCTCC ATCAACTGGG GCGTAACGCG AAAGGGCCGT TTGTACGCTA TGAACTCACG CCGGAGAATG CCGGGCAGTT GGAGACATTC ATCGACCAGG CGCAAGGAGG TACGCTGGTG TTGAGTCATC CCGAATATCT GACACGCGAA CAGCAGCACC ATCTGGCGCG TTTACAAAGC CTGGAGCATC GGCCTTTTCG TTTGGTGGGC GTTGGTAGCG CTTCGCTGGT GGAGCAGGCG GCAGCTAACC AGATTGCGGC CGAGCTTTAC TACTGTTTCG CCATGACCCA AATCGCCTGC CAGTCTCTTT CTCAGCGACC GGATGATATC GAACCGTTAT TTCGCCATTA TCTTCGAAAA GCCTGCCTGC GGCTCAATCA TCCAGTGCCG GAAATAGCGG GGGAATTACT GAAAGGAATA ATGCGACGCG CCTGGCCAAG CAATGTGCGC GAATTGGCTA ATGCGGCAGA GCTTTTTGCT GTTGGCGTGC TGCCGCTGGC GGAAACGGTC AACCCGCAGT TGCTTCTGCA GGAGCCGACC CCGCTTGACC GGCGCGTTGA AGAGTATGAG CGACAAATTA TTACCGAAGC ATTAAATATT CATCAGGGAC GAATTAATGA AGTGGCGGAG TACCTGCAAA TTCCCCGTAA AAAACTTTAT CTGCGCATGA AAAAATATGG TCTAAGTAAA GAGCATTATA AATTCTGA
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Protein sequence | MLNDECSILL IDDDVDVLDA YTQMLEQAGY RVRGFTHPFE AKEWVKADWE GIVLSDVCMP GCSGIDLMTL FHQDDDQLPI LLITGHGDVP MAVDAVKKGA WDFLQKPVDP GKLLILIEDA LRQRRSVIAR RQYCQQTLQV ELIGRSEWMN QFRQRLQQLA ETDIAVWFYG EHGTGRMTGA RYLHQLGRNA KGPFVRYELT PENAGQLETF IDQAQGGTLV LSHPEYLTRE QQHHLARLQS LEHRPFRLVG VGSASLVEQA AANQIAAELY YCFAMTQIAC QSLSQRPDDI EPLFRHYLRK ACLRLNHPVP EIAGELLKGI MRRAWPSNVR ELANAAELFA VGVLPLAETV NPQLLLQEPT PLDRRVEEYE RQIITEALNI HQGRINEVAE YLQIPRKKLY LRMKKYGLSK EHYKF
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