| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2582 |
|---|
| Symbol | |
|---|
| ID | 6484974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 2503777 |
|---|
| End bp | 2504718 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642737916 |
|---|
| Product | inner membrane protein YfdC |
|---|
| Protein accession | YP_002041657 |
|---|
| Protein GI | 194442575 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2116] Formate/nitrite family of transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.300415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGCC TTAACGACGA TAAAATTAAC CGGCACAGCA GTGACCTGGA AGTTGAAAGC
GAAGAAAAAC AAAGCGGTAA AGAGATTGAA GTAGATGAAG ATCGTCTTCC TTCCCGCGCC
ATGGCGATTC ATGAACATAT TCGCCAGGAT GGTGAAAAAG AGATGGAACG CGATGCGATG
GCTTTGCTCT GGTCAGCCAT TGCCGCAGGA CTTTCTATGG GGGCATCACT CCTGGCGAAA
GGGATTTTCC ACGTGCAGCT TGAAGGCGTT CCCGGCGGCT TTTTACTGGA AAATCTCGGC
TATACCTTTG GTTTTATCAT TGTCATCATG GCCCGCCAGC AATTATTTAC TGAAAATACC
GTTACCGCCG TATTGCCGGT AATGCAAAAT CCCACTCTGA GTAACGTTGG CCTGCTGATG
CGCTTGTGGG GCGTAGTCTT ATTGGGCAAC CTTATTGGCA CCGGGGTTGC GGCGTGGGCA
TTTGAATATA TGCCTATATT TGATGAAGAG ACCCGCGACG CCTTTGTCAA AATTGGTATG
GAGGTCATGA AAAATAGCCC AACGGAGATG TTTGCCAACG CGATTATCTC TGGCTGGATC
ATCGCCACAA TGGTATGGAT GTTTCCTGCA GCAGGCGGGG CAAAGATTGT GGTCATTATT
TTGATGACCT GGCTTATCGC GCTGGGCGAT ACCACCCATA TTGTCGTCGG TTCCGTTGAA
ATTTTGTATT TGGTTTTCAA CGGCACGCTG CCCTGGAGCG ACTTTCTCTG GCCCTTCGCC
CTTCCCACAC TTGCCGGAAA TATCTGCGGC GGCACTTTTA TTTTCGCATT GATGAGCCAC
GCGCAGATCC GCAACGATAT GAGCAATAAG CGTAAGGAAG AAGCGAGGCT ACGCGGCGAG
CGCCTGGAAC GGGAGCGGAA AAAAGCGGAA AAACAGCGCT GA
|
|---|
| Protein sequence | MDSLNDDKIN RHSSDLEVES EEKQSGKEIE VDEDRLPSRA MAIHEHIRQD GEKEMERDAM
ALLWSAIAAG LSMGASLLAK GIFHVQLEGV PGGFLLENLG YTFGFIIVIM ARQQLFTENT
VTAVLPVMQN PTLSNVGLLM RLWGVVLLGN LIGTGVAAWA FEYMPIFDEE TRDAFVKIGM
EVMKNSPTEM FANAIISGWI IATMVWMFPA AGGAKIVVII LMTWLIALGD TTHIVVGSVE
ILYLVFNGTL PWSDFLWPFA LPTLAGNICG GTFIFALMSH AQIRNDMSNK RKEEARLRGE
RLERERKKAE KQR
|
|---|
| |