| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2581 |
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| Symbol | |
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| ID | 6484560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2502733 |
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| End bp | 2503488 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642737915 |
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| Product | lipoprotein VacJ family |
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| Protein accession | YP_002041656 |
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| Protein GI | 194444941 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.134529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTC GCCTGTCGGC GCTGGCGCTG GGAACCACAC TGCTGGTCGG GTGTGCGAGT
TCCGGTACAG AACAGCAGGG GCGTTCAGAC CCATTTGAAG GGTTTAACCG CACCATGTAC
AACTTCAACT TTAATGTGCT GGACCCGTAT GTTGTTCGGC CGGTCGCGGT CGCCTGGCGT
GATTATGTTC CACAGCCTGC GCGTAACGGT TTAAGTAATT TCACCGGCAA CCTCGAAGAA
CCGGCGATCA TGGTGAACTA TTTCCTGCAG GGCGATCCTT ATCAGGGTAT GGTGCATTTC
ACCCGTTTCT TCCTGAACAC CTTATTAGGG ATGGGCGGCT TTATTGACGT CGCGGGAATG
GCGAATCCTA AGCTGCAGCG CGTTGAACCG CATCGCTTTG GCAGTACGCT GGGCCATTAT
GGCGTGGGGT ATGGGCCTTA TATGCAACTT CCGTTCTACG GCAGCTTCAC GCTGCGTGAA
GATGGCGGGG ATATGGCGGA TACCTTGTAT CCGGTGCTCT CGTGGTTGAC CTGGCCAATG
TCCATAGGAA AATGGACTAT CGAAGGGATA GAAACCCGCG CGCAGTTGCT GGACTCCGAT
GGTTTGCTGC GCCAGTCTTC CGATCCTTAT ATTATGGTGC GCGAGGCGTA CTTCCAGCGT
CATGACTTTA TCGCCAATGG CGGAAAACTC AAGCCGCAGG AAAACCCGAA CGCGCAGGCG
ATTCAGGACG AACTCAAAGA GATCGACTCG GAATAA
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| Protein sequence | MKLRLSALAL GTTLLVGCAS SGTEQQGRSD PFEGFNRTMY NFNFNVLDPY VVRPVAVAWR
DYVPQPARNG LSNFTGNLEE PAIMVNYFLQ GDPYQGMVHF TRFFLNTLLG MGGFIDVAGM
ANPKLQRVEP HRFGSTLGHY GVGYGPYMQL PFYGSFTLRE DGGDMADTLY PVLSWLTWPM
SIGKWTIEGI ETRAQLLDSD GLLRQSSDPY IMVREAYFQR HDFIANGGKL KPQENPNAQA
IQDELKEIDS E
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