Gene SNSL254_A2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2552 
Symbol 
ID6485172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2475660 
End bp2476334 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content58% 
IMG OID642737887 
Producthypothetical protein 
Protein accessionYP_002041628 
Protein GI194446501 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAGTA AGTTTCAGAA TCGTTTAGTC GGCACGATTG TGTTAGTCGC GCTGGGGGTT 
ATTGTGCTTC CCGGTCTGTT GGACGGACAG AAAAAGCATT ATCAGGATGA ATTTGCTGCG
ATTCCACTGG TACCGAAGCC TGGCGACCGC GATGAGCCGG ATATGATGCC TGCCGCAACG
CAGGCGCTGC CGACACAGCC GCCGGAAGGG GCAGCTGAAG AGGTGCGGGC GGGAGATGCG
GCAGCGCCAT CTCTGGACCC GTCGCGCATG GCGTCTAACA ATGTCGAGCT TGATCCGATA
CCGGTGGAGA CGCCTAAACC GAAGCCGGTT GAAAAGCCGA AGCCGCAGCC TAAACCGCAA
CAGCCGGTTG TCGCCGCTTC CACGCCGACG CCCGCGCCGC AACAGGCTAC CGACGATAAA
CCTGCGCCGA CCGGCAAAGC CTATGTCGTA CAGTTGGGCG CGCTGAAAAA TGCGGATAAA
GTCAACGAGA TAGTCGGCAA GCTTCGTTCC GCCGGGTTCC GGGTTTATAC TTCCCCCTCA
ACGCCGGTAC AGGGTAAAAT AACCCGTATT CTCGTCGGGC CGGATGCGTC GAAAGATAAG
ATGAAAGGAT CGCTTGGCGA GCTCAAGCAG ATTTCCGGGT TAAGCGGCGT GGTGATGGGA
TATAGCCCGA ACTAA
 
Protein sequence
MASKFQNRLV GTIVLVALGV IVLPGLLDGQ KKHYQDEFAA IPLVPKPGDR DEPDMMPAAT 
QALPTQPPEG AAEEVRAGDA AAPSLDPSRM ASNNVELDPI PVETPKPKPV EKPKPQPKPQ
QPVVAASTPT PAPQQATDDK PAPTGKAYVV QLGALKNADK VNEIVGKLRS AGFRVYTSPS
TPVQGKITRI LVGPDASKDK MKGSLGELKQ ISGLSGVVMG YSPN