Gene SNSL254_A2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2539 
SymbolhisM 
ID6482738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2461890 
End bp2462597 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content52% 
IMG OID642737874 
Producthistidine ABC transporter permease protein HisM 
Protein accessionYP_002041615 
Protein GI194444404 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.953972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGAGA TCATTCAGGA GTACTGGAAA TCCCTGCTGT GGACGGATGG CTATCGTTTT 
ACCGGCGTGG CGATTACGCT GTGGCTGTTA ATTTCATCGG TGGTGATGGG CGGTCTTCTG
GCGGTGATTC TGGCGGTAGG TCGCGTTTCC AGTAATAAAT TCATCCGTTT TCCCATCTGG
CTGTTTACGT ATATTTTTCG CGGCACGCCG CTGTACGTAC AGCTACTGGT GTTCTATTCG
GGGATGTATA CGCTGGAGAT AGTCAAAGGC ACCGATCTTC TTAACGCGTT TTTCCGCAGC
GGACTGAACT GTACCGTACT GGCGCTGACG CTGAATACCT GCGCGTACAC CACGGAAATT
TTCGCGGGGG CGATTCGTTC GGTACCGCAC GGTGAAATTG AAGCGGCACG GGCCTATGGC
TTCTCGTCAT TTAAAATGTA TCGCTGCATT ATTTTGCCGT CGGCATTACG CATCGCCTTG
CCTGCCTACA GCAACGAAGT GATTTTAATG CTGCACTCTA CGGCGCTGGC GTTTACCGCG
ACGGTGCCGG ATTTGTTGAA AATCGCCCGC GATATTAACT CAGCGACTTA CCAGCCGTTT
ACCGCGTTTG GCATTGCCGC CGTGTTGTAT TTACTCATTT CGTATGTCCT GATAAGCCTG
TTCCGTCGGG CGGAAAGACG CTGGTTGCAG CACGTGTCCT CTAAATAA
 
Protein sequence
MIEIIQEYWK SLLWTDGYRF TGVAITLWLL ISSVVMGGLL AVILAVGRVS SNKFIRFPIW 
LFTYIFRGTP LYVQLLVFYS GMYTLEIVKG TDLLNAFFRS GLNCTVLALT LNTCAYTTEI
FAGAIRSVPH GEIEAARAYG FSSFKMYRCI ILPSALRIAL PAYSNEVILM LHSTALAFTA
TVPDLLKIAR DINSATYQPF TAFGIAAVLY LLISYVLISL FRRAERRWLQ HVSSK