Gene SNSL254_A2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2534 
Symbol 
ID6485808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2457991 
End bp2458542 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content55% 
IMG OID642737869 
Productphosphodiesterase 
Protein accessionYP_002041610 
Protein GI194445239 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000222092 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.679181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA TGTTCGCATC GGACATTCAT GGTTCTTTAC CCGCCACGGA ACGCGTGCTT 
GAGCGGTTCG CGCAAAGCGG CGCGCGTTGG CTGGTGATAT TAGGCGATGT CCTTAACCAC
GGGCCGCGAA ATGCGCTGCC TGAAGGCTAT GCGCCCGCCC AGGTAGCCGA ACGCCTGAAC
GCGGTGGCGA CGCAAATCAT TGCCGTGCGC GGCAACTGCG ATAGCGAAGT GGATCAGATG
CTGCTGCATT TCCCGATCAC TGCGCCGTGG CAGCAAATAT TGACGCAAGA GAGGCGGCTA
TTTTTAACGC ATGGGCACCT CTTCGGGCCG ACGAATCTGC CCGCTCTGCA TACTGGCGAT
GTGTTGGTCT ATGGTCATAC GCATCTGCCG GTGGCGCAAC AGCAGGAAGG ACTGTATCAC
TTTAATCCTG GGTCAGTGAG CATCCCGAAA GGCGGGTATG CGGCAAGCTA CGGTATTCTG
GATGATAATG TGTTGAGCGT AATCGCACTC AATGATCAAA GTATCATTGC GCAGGTTGCA
ATTAACTCGT AA
 
Protein sequence
MKLMFASDIH GSLPATERVL ERFAQSGARW LVILGDVLNH GPRNALPEGY APAQVAERLN 
AVATQIIAVR GNCDSEVDQM LLHFPITAPW QQILTQERRL FLTHGHLFGP TNLPALHTGD
VLVYGHTHLP VAQQQEGLYH FNPGSVSIPK GGYAASYGIL DDNVLSVIAL NDQSIIAQVA
INS