Gene SNSL254_A2528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2528 
SymbolulaA 
ID6483531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2453894 
End bp2455285 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content52% 
IMG OID642737863 
ProductPTS system ascorbate-specific transporter subunit IIC 
Protein accessionYP_002041604 
Protein GI194444935 
COG category[S] Function unknown 
COG ID[COG3037] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.544769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.25931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATCC TTGAAACGCT GAATTTTGTT GTTGATATTT TAAAAGTGCC CTCGGTGCTT 
GTAGGGTTAA TTGCGCTGAT TGGTCTGGTG GCGCAGAAAA AAGCGTTTTC CGATGTGGTA
AAAGGCACGA TTAAAACCAT TTTAGGTTTT ATTGTGCTTG GCGGTGGCGC AACCGTACTG
GTGGGTTCAT TAAATCCGCT AGGGGGTATG TTTGAACACG CTTTTAATAT TCAGGGCATT
ATTCCTAATA ATGAAGCGAT AGTCTCAATC GCGCTGGAAA AATATGGCGC GTCCACGGCG
TTAATTATGG CATTTGGTAT GGTGGCCAAT ATTGTCGTGG CGCGCTTTAC GCGTCTTAAA
TATATCTTTT TGACCGGGCA TCACACCTTT TACATGGCCT GTATGATTGG CGTAATCCTG
ACCGTGGCGG GGTTTGAGGG CGTAGGGCTG GTCTTCACCG GATCGCTGAT CCTGGGGCTG
GTGATGGCCT TCTTCCCGGC GTTGGCCCAA CGTTATATGA GGCGGATTAC CGGTACCGAT
GACATTGCGT TTGGTCACTT CGGTACCCTG GGATATGTGC TTTCCGGCTG GATTGGCAGC
CTGTGTGGTA AAGGCTCCCG CTCCACGGAA GAGATGAACC TGCCGAAAAA CCTCAGTTTT
TTACGCGACA GTTCTATCTC GATTTCGCTG ACCATGATGA TTATCTATCT GATTATGGCA
GTCAGCGCAG GGCGTGAGTA TGTCGAAGCG ACGTTTAGCG GCGGGCAAAA CTATCTGGTG
TACGCCATCA TCATGGCAAT CACCTTCGCC GCCGGCGTGT TCATCATTCT GCAAGGCGTC
CGTCTGATTC TGGCGGAAAT TGTTCCGGCC TTTACCGGCT TTTCAGAAAA ACTGGTGCCA
AACGCGCGTC CGGCGCTGGA CTGCCCGGTG GTGTATCCCT ATGCCCCTAA CGCGGTACTG
ATTGGCTTCC TGTTCAGTTT TCTCGGTGGG CTGGTGGGGC TGTTCCTGCT TGGACAGATG
AAGCTTGTGT TAATCCTGCC AGGCGTTGTG CCGCACTTCT TTACCGGCGC GACCGCAGGC
GTCTTTGGCA ATGCCACCGG CGGTCGCCGC GGGGCGATGA TCGGCGCATT TGCTAATGGT
CTATTAATCA CTTTCCTGCC AGTGCTGTTA CTGCCGGTTC TCGGCGCGAT CGGCTTCGCC
AATACCACGT TCTCGGATGC TGACTTTGGC GTAATCGGTA TTTTGCTGGG CAACCTGGCG
CGTTATCTGT CGCCGATGGC TATCACGGGG CTGGTGGTGG CGCTATTCGC GCTACTGGTG
GCGTACAACG TGTTGGCCAA AAACAAAAAA GCGACTGCCG AAGTGCAGGA AAATAGCGGA
GCGAAAGAAT GA
 
Protein sequence
MFILETLNFV VDILKVPSVL VGLIALIGLV AQKKAFSDVV KGTIKTILGF IVLGGGATVL 
VGSLNPLGGM FEHAFNIQGI IPNNEAIVSI ALEKYGASTA LIMAFGMVAN IVVARFTRLK
YIFLTGHHTF YMACMIGVIL TVAGFEGVGL VFTGSLILGL VMAFFPALAQ RYMRRITGTD
DIAFGHFGTL GYVLSGWIGS LCGKGSRSTE EMNLPKNLSF LRDSSISISL TMMIIYLIMA
VSAGREYVEA TFSGGQNYLV YAIIMAITFA AGVFIILQGV RLILAEIVPA FTGFSEKLVP
NARPALDCPV VYPYAPNAVL IGFLFSFLGG LVGLFLLGQM KLVLILPGVV PHFFTGATAG
VFGNATGGRR GAMIGAFANG LLITFLPVLL LPVLGAIGFA NTTFSDADFG VIGILLGNLA
RYLSPMAITG LVVALFALLV AYNVLAKNKK ATAEVQENSG AKE