Gene SNSL254_A2520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2520 
Symbol 
ID6485980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp2445539 
End bp2446078 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content51% 
IMG OID642737855 
Producthypothetical protein 
Protein accessionYP_002041596 
Protein GI194444362 
COG category[S] Function unknown 
COG ID[COG3013] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.499876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.263653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCTT TTTTTCATCG CCATAGCGTG ATACAGGAGT TCAAAATGGA AATGACCAAC 
GCGCAACGTC TGATTTTGTC TAACCAGTAC AAAATGATGA CGATGCTCGA TCCCACCAAC 
GCCGAGCGTT ACCGTCGCTT ACAAACAATT ATTGAACGCG GCTACGGCCT GCAGATGCGC 
GAGCTGGATC GCGAGTTTGG CGAGCTGACG GAAGAGACCT GTCGTACCAT CATCGATATT 
ATGGAGATGT ACCATGCGCT GCACGTCTCC TGGACCAACC TCAAAGATAC GCAAGCTATC 
GACGAACGTC GCGTCACCTT CCTGGGGTTT GACGCCGCGA CGGAAGCGCG CTACCTCGGC 
TATGTCCGTT TTATGGTGAA TATAGAAGGA CGCTACACTC ACTTTGACGC CGGGACACAC 
GGCTTTAATG CCCAGACGCC GATGTGGGAA AAATACCAGC GGATGTTGAA TGTCTGGCAT 
GCCTGCCCGC GTCAGTACCA CCTGAGCGCG AATGAAATCA ATCAAATCAT TAATGCCTGA
 
Protein sequence
MPSFFHRHSV IQEFKMEMTN AQRLILSNQY KMMTMLDPTN AERYRRLQTI IERGYGLQMR 
ELDREFGELT EETCRTIIDI MEMYHALHVS WTNLKDTQAI DERRVTFLGF DAATEARYLG 
YVRFMVNIEG RYTHFDAGTH GFNAQTPMWE KYQRMLNVWH ACPRQYHLSA NEINQIINA