Gene SNSL254_A2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2486 
SymbolarnT 
ID6484943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2410729 
End bp2412375 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content54% 
IMG OID642737821 
Product4-amino-4-deoxy-L-arabinose transferase 
Protein accessionYP_002041562 
Protein GI194445284 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAT CGATACGCTA TTATCTGGCT TTCGCCGCGT TTATCGCGCT CTACTATGTT 
ATTCCTGTCA ACAGCCGCCT GCTCTGGCAG CCGGATGAAA CGCGCTATGC CGAAATAAGT
CGGGAGATGC TGGTGTCTGG CGACTGGATC GTGCCGCATT TTCTGGGATT ACGTTATTTT
GAAAAACCGA TAGCCGGTTA CTGGATAAAC AGTCTGGGTC AGTGGCTTTT TGGCGCTACC
AATTTTGGCG TGCGGGCTGG CGCTATTTTA ACGACATTGC TGGCCGCAGC GCTGGTGGCG
TGGCTGACGT TCCGCTTATG GCGGGATAAA CGTACCGCGT TGCTCGCCTC CGTGATCTTT
CTCTCCCTCT TTGCCGTTTA CAGTATCGGG ACGTATGCGG TACTCGACCC GATGATCGCG
CTTTGGCTTA CGGCCGGGAT GTGTTGTTTC TGGCAGGGGA TGCAGGCCAC GACCCGAACG
GGCAAGATTG GGATGTTTTT GCTACTGGGC GCAACCTGCG GTCTGGGTGT ATTAACTAAA
GGGTTCCTCG CCCTGGCCGT ACCGGTGGTG AGCGTGCTGC CGTGGGTTAT TGTTCAGAAA
CGCTGGAAGG ACTTTTTGCT ATACGGCTGG CTGGCGGTCT TGAGCTGCTT TGTGGTTGTC
CTTCCCTGGG CGATCGCCAT TGCGCGACGC GAAGCCGATT TCTGGCATTA CTTTTTCTGG
GTGGAGCATA TCCAGAGATT CGCCATGAGC GATGCCCAGC ATAAAGCCCC TTTCTGGTAC
TATCTGCCGG TGCTGCTCGC GGGAAGTTTA CCGTGGCTGG GGTTACTGCC TGGCGCGCTT
AAACTGGGCT GGCACGAGCG AAACGGCGCA TTCTATTTGC TCGGATGGAC GATCATGCCG
CTTCTCTTTT TCAGCATTGC GAAAGGGAAA CTGCCCACCT ATGTTCTTTC CTGTTTCGCA
CCGATAGCGA TACTCATGGC GCGCTTCGTC CTGCATAACG TAAAAGAAGG CGTCGCCGCG
CTACGTGTCA ACGGCGGGAT CAACCTGGTG TTCGGGATAA TCGGGATCGT CGCGGCGTTT
GTCGTCTCCT CATGGGGCCC GCTGAAATCG CCGGTGTGGA CGCATATCGA AACCTATAAA
GTGTTTTGCG TCTGGGGCGT CTTTACTGTT TGGGCGTTTG TGGGCTGGTA TAGCCTCTGT
CATAGCCCAA AATACCTATT ACCCGCGTTT TGTCCGCTGG GACTGGCGCT GCTGTTCGGC
TTTTCCGTCC CCGACAGGGT GATGGAGTCC AAACAGCCAC AGTTTTTTGT CGAAATGACC
CAGGCGCCTT TGGCATCAAG CCGCTATATT CTTGCCGACA GCGTGGGCGT CGCCGCCGGG
CTGGCCTGGA GTCTGAAACG AGACGATATT ATGCTCTACG GACACGCGGG CGAACTCCGG
TATGGTCTTA GCTATCCTGA TGTACAGAAT AAATTCGTTA AAGCCGACGA TTTTAACGCC
TGGCTCAACC AGCATCGTCA GGAGGGCATT ATTACGCTAG TACTTTCAAT AGACAAAGAC
GAAGACATCA GCGCTCTTTC CCTTCCCCCT GCGGACAATG TTGATTATCA GGGGCGTCTG
GTGTTAATTC AGTATCGGCC TAAATGA
 
Protein sequence
MMKSIRYYLA FAAFIALYYV IPVNSRLLWQ PDETRYAEIS REMLVSGDWI VPHFLGLRYF 
EKPIAGYWIN SLGQWLFGAT NFGVRAGAIL TTLLAAALVA WLTFRLWRDK RTALLASVIF
LSLFAVYSIG TYAVLDPMIA LWLTAGMCCF WQGMQATTRT GKIGMFLLLG ATCGLGVLTK
GFLALAVPVV SVLPWVIVQK RWKDFLLYGW LAVLSCFVVV LPWAIAIARR EADFWHYFFW
VEHIQRFAMS DAQHKAPFWY YLPVLLAGSL PWLGLLPGAL KLGWHERNGA FYLLGWTIMP
LLFFSIAKGK LPTYVLSCFA PIAILMARFV LHNVKEGVAA LRVNGGINLV FGIIGIVAAF
VVSSWGPLKS PVWTHIETYK VFCVWGVFTV WAFVGWYSLC HSPKYLLPAF CPLGLALLFG
FSVPDRVMES KQPQFFVEMT QAPLASSRYI LADSVGVAAG LAWSLKRDDI MLYGHAGELR
YGLSYPDVQN KFVKADDFNA WLNQHRQEGI ITLVLSIDKD EDISALSLPP ADNVDYQGRL
VLIQYRPK