Gene SNSL254_A2474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2474 
Symbol 
ID6485640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2397802 
End bp2398605 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content54% 
IMG OID642737809 
Productputative aldolase 
Protein accessionYP_002041550 
Protein GI194443780 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAT TGTTATCAAA TCCTTTTAAA GAAGGATTAC GTAAAGGGGA TACGCAAATT 
GGTTTGTGGC TCAGTTCAAC CACCTCTTAT ATGGCGGAGA TTGCGGCGAC GTCGGGTTAT
GACTGGTTGT TAATAGATGG CGAGCACGCG CCTAATACGG TGCAGGACTT GTATCATCAG
TTACAGGCCA TCGCCCCATA CGCCAGCCAG CCGGTGATTC GCCCGATCGA GGGAAGTAAA
GCGCTCATTA AACAGGTACT GGACATCGGG GCGCAAACGC TACTGATCCC GATGGTTGAC
ACCGCAGAAC AGGCGCGCCA GGTCGTTTCC GCTACCCGAT ACCCGCCGTT GGGGCAACGA
GGCGTTGGCG CGAGCGTGGC GCGTGCGGCT CGCTGGGGGA GAATCGACAA CTATATGGCA
CAGGCCAATG AGTCGCTCTG CCTGTTGGTG CAGGTTGAAA GCAAAGTGGC GCTGGAAAAC
CTTGACGCGA TTCTGGAGGT TGAAGGCATT GATGGCGTCT TTATCGGTCC GGCAGATCTC
TCTGCTTCAT TGGGTTACCC CGATAATGCC GGACACCCGG AAGTGCAGCG AATCATTGAA
TCGTGTATTT ATCGTATTCG CGCCGCCGGA AAAGCGGCGG GTTTTTTGGC GGTCGATCCG
GCAATGGCGC AGAAATGTCT GGCGTGGGGC GCGAATTTTG TCGCGGTCGG GGTAGATACG
ATGCTCTACA CCGAGGCGCT GGACAGCAGG TTGGCGATGT TTAAATCTGT TCAGTCAGTA
AGCACGGCAA AACGTAGTTA TTGA
 
Protein sequence
MNALLSNPFK EGLRKGDTQI GLWLSSTTSY MAEIAATSGY DWLLIDGEHA PNTVQDLYHQ 
LQAIAPYASQ PVIRPIEGSK ALIKQVLDIG AQTLLIPMVD TAEQARQVVS ATRYPPLGQR
GVGASVARAA RWGRIDNYMA QANESLCLLV QVESKVALEN LDAILEVEGI DGVFIGPADL
SASLGYPDNA GHPEVQRIIE SCIYRIRAAG KAAGFLAVDP AMAQKCLAWG ANFVAVGVDT
MLYTEALDSR LAMFKSVQSV STAKRSY